RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 IFT20Q8IY31 132 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 SYTL1Q8IYJ3 562 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 GIMAP7Q8NHV1 300 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 DENND1AQ8TEH3 1009 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 EEF1AKMT1Q8WVE0 214 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 PMEPA1Q969W9 287 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 ZNF501Q96CX3 271 aaPredicted RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 LINGO1Q96FE5 620 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 CCDC138Q96M89 665 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 PPM1MQ96MI6 270 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 KLHL25Q9H0H3 589 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 GPN2Q9H9Y4 310 aaPredicted RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 PLAC1Q9HBJ0 212 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 MED16Q9Y2X0 877 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 AP1M2Q9Y6Q5 423 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 FRYQ5TBA9 3013 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 TARM1B6A8C7 271 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PVRP15151 417 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 SPRP35270 261 aaPredicted RBP14.18□□□□□ -0.14
CHD1-202ENST00000414220 PNLIPRP1P54315 467 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 CDKN2DP55273 166 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 ITGA1P56199 1179 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 MC1RQ01726 317 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 POU4F1Q01851 419 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 CCSMST1Q4G0I0 132 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 GRTP1Q5TC63 336 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 THEMIS2Q5TEJ8 643 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PWWP2BQ6NUJ5 590 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 CYHR1Q6ZMK1 362 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PIWIL4Q7Z3Z4 852 aaKnown RBP14.18□□□□□ -0.14
CHD1-202ENST00000414220 TRIM73Q86UV7 250 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 LMNTD1Q8N9Z9 388 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 LINC01555Q8NAE3 123 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 NOA1Q8NC60 698 aaKnown RBP14.18□□□□□ -0.14
CHD1-202ENST00000414220 CLIP3Q96DZ5 547 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 FMO2Q99518 471 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PKP4Q99569 1192 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 NRTNQ99748 197 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 MENTQ9BUN1 341 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 SLC12A9Q9BXP2 914 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PCBD2Q9H0N5 130 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PARVBQ9HBI1 364 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 POPDC3Q9HBV1 291 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 LRRC4CQ9HCJ2 640 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 SLC17A6Q9P2U8 582 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 KCND3Q9UK17 655 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PLCL2Q9UPR0 1127 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 SSUH2Q9Y2M2 353 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 PCDHB3Q9Y5E6 796 aa14.18□□□□□ -0.14
CHD1-202ENST00000414220 TEX51A0A1B0GUA7 166 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 FAM159BA6NKW6 160 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 K7ENP7 123 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 OR2B3O76000 313 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 DLGAP3O95886 979 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 MAGP20916 626 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 ABATP80404 500 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 TRADDQ15628 312 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.17□□□□□ -0.14
CHD1-202ENST00000414220 ARHGAP40Q5TG30 622 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 TLDC1Q6P9B6 456 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 INO80CQ6PI98 192 aaPredicted RBP14.17□□□□□ -0.14
CHD1-202ENST00000414220 FIGLAQ6QHK4 219 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 CDHR3Q6ZTQ4 885 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 PPM1NQ8N819 430 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 GALNT6Q8NCL4 622 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 FBF1Q8TES7 1133 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 ATL1Q8WXF7 558 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 ANKRD7Q92527 254 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 PDLIM5Q96HC4 596 aaKnown RBP14.17□□□□□ -0.14
CHD1-202ENST00000414220 SPRY4Q9C004 299 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 TWSG1Q9GZX9 223 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 PRORYQ9H606 182 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 CPNE5Q9HCH3 593 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 GPAMQ9HCL2 828 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 MRPS30Q9NP92 439 aaKnown RBP14.17□□□□□ -0.14
CHD1-202ENST00000414220 ZDHHC18Q9NUE0 388 aa14.17□□□□□ -0.14
CHD1-202ENST00000414220 DMGDHQ9UI17 866 aaKnown RBP14.17□□□□□ -0.14
CHD1-202ENST00000414220 EFSO43281 561 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 SLC16A8O95907 504 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 NTRK1P04629 796 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 ENO2P09104 434 aaPredicted RBP14.16□□□□□ -0.14
CHD1-202ENST00000414220 ERGP11308 486 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 STMN1P16949 149 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 ZNF28P17035 718 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 AGXTP21549 392 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 CCND1P24385 295 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 PEBP1P30086 187 aaKnown RBP14.16□□□□□ -0.14
CHD1-202ENST00000414220 AP1S2P56377 157 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 GPX6P59796 221 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 RHDQ02161 417 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 USP10Q14694 798 aaKnown RBP14.16□□□□□ -0.14
CHD1-202ENST00000414220 SLMAPQ14BN4 828 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 TCTE1Q5JU00 501 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 VASH2Q86V25 355 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 FLVCR1-AS1Q8TAF5 88 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 LRFN5Q96NI6 719 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 CYTH2Q99418 400 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 RBBP8Q99708 897 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 MIPEPQ99797 713 aa14.16□□□□□ -0.14
CHD1-202ENST00000414220 C17orf62Q9BQA9 187 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms