RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PCDHGA3Q9Y5H0 932 aa24.62■■□□□ 1.53
U2AF1-203ENST00000398137 CFAP46Q8IYW2 2715 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 OR6C74A6NCV1 312 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 NPEPPSL1A6NEC2 478 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 NUDT17P0C025 328 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 CAPZBP47756 277 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 GRB7Q14451 532 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 WDR74Q6RFH5 385 aaPredicted RBP24.61■■□□□ 1.53
U2AF1-203ENST00000398137 UBE2R2Q712K3 238 aaPredicted RBP24.61■■□□□ 1.53
U2AF1-203ENST00000398137 ARHGAP22Q7Z5H3 698 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 AGBL5Q8NDL9 886 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 NCSTNQ92542 709 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 PDLIM5Q96HC4 596 aaKnown RBP24.61■■□□□ 1.53
U2AF1-203ENST00000398137 IL17FQ96PD4 163 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 TAAR9Q96RI9 348 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 B3GALT1Q9Y5Z6 326 aa24.61■■□□□ 1.53
U2AF1-203ENST00000398137 CCDC151A5D8V7 595 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 GFYI3L273 518 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 KDM1AO60341 852 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 C8GP07360 202 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 SNRPAP09012 282 aaKnown RBP24.6■■□□□ 1.53
U2AF1-203ENST00000398137 CCDC166P0CW27 439 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 MAP4P27816 1152 aaKnown RBP24.6■■□□□ 1.53
U2AF1-203ENST00000398137 TYK2P29597 1187 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 PKLRP30613 574 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 SHMT2P34897 504 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 SP140Q13342 867 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 LY6DQ14210 128 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 CSHL1Q14406 222 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 TAF1BQ53T94 588 aaPredicted RBP24.6■■□□□ 1.53
U2AF1-203ENST00000398137 AMIGO1Q86WK6 493 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 MAGEC3Q8TD91 643 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 DLG3Q92796 817 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 RAD51AP1Q96B01 352 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 AKAP7Q9P0M2 348 aaPredicted RBP24.6■■□□□ 1.53
U2AF1-203ENST00000398137 TBK1Q9UHD2 729 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 PLAAQ9Y263 795 aa24.6■■□□□ 1.53
U2AF1-203ENST00000398137 BTN3A1O00481 513 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 ZBTB14O43829 449 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 SYF2O95926 243 aaKnown RBP24.59■■□□□ 1.53
U2AF1-203ENST00000398137 CD82P27701 267 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 CSRP3P50461 194 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 IRF9Q00978 393 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 IFFO1Q0D2I5 559 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 LGSNQ5TDP6 509 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 KLHL35Q6PF15 583 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 TBC1D1Q86TI0 1168 aaPredicted RBP24.59■■□□□ 1.53
U2AF1-203ENST00000398137 OOSP2Q86WS3 158 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 LMNTD1Q8N9Z9 388 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 ISL2Q96A47 359 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 MENTQ9BUN1 341 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 DERL2Q9GZP9 239 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 PPCSQ9HAB8 311 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 TLK1Q9UKI8 766 aa24.59■■□□□ 1.53
U2AF1-203ENST00000398137 A0A096LPK6 155 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 IQANK1A0A1B0GTG1 560 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 OR5K3A6NET4 321 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 EFCAB7A8K855 629 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 A8MU76 341 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 MYO1CO00159 1063 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 CDC7O00311 574 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 C2P06681 752 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 POLR2CP19387 275 aaPredicted RBP24.58■■□□□ 1.53
U2AF1-203ENST00000398137 CYP2A7P20853 494 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 CSTF2P33240 577 aaKnown RBP eCLIP24.58■■□□□ 1.53
U2AF1-203ENST00000398137 MAGEA12P43365 314 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 RAB28P51157 221 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 GFERP55789 205 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 PPP1CAP62136 330 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 C19orf57Q0VDD7 668 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 PHKG1Q16816 387 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 SNAP47Q5SQN1 464 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 OR9A1PQ8NGU1 263 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 KCTD4Q8WVF5 259 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 MTBPQ96DY7 904 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 PKP4Q99569 1192 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 DDA1Q9BW61 102 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 SLC12A9Q9BXP2 914 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 SPRY4Q9C004 299 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 VPS11Q9H270 941 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 WDR70Q9NW82 654 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 HRASLS2Q9NWW9 162 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 PDE10AQ9Y233 779 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 ACOT9Q9Y305 439 aa24.58■■□□□ 1.53
U2AF1-203ENST00000398137 A0A087X1B8 175 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 B4E171 279 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 BTN3A3O00478 584 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 RASGRF2O14827 1237 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 SLC16A5O15375 505 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 TSPAN7P41732 249 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 DLG1Q12959 904 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 TSNQ15631 228 aaKnown RBP24.57■■□□□ 1.52
U2AF1-203ENST00000398137 TMEM164Q5U3C3 297 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 ANKS6Q68DC2 871 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 ARMC6Q6NXE6 501 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 IRGCQ6NXR0 463 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 TAX1BP1Q86VP1 789 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 TDRPQ86YL5 185 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 ADGRF3Q8IZF5 1079 aa24.57■■□□□ 1.52
U2AF1-203ENST00000398137 C2orf73Q8N5S3 287 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms