RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TMEM207Q6UWW9 146 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 RPTNQ6XPR3 784 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 TAS2R42Q7RTR8 314 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 PRSS58Q8IYP2 241 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 C2orf73Q8N5S3 287 aaPredicted RBP15.13■□□□□ 0.01
SNCA-205ENST00000394991 BRIX1Q8TDN6 353 aaKnown RBP15.13■□□□□ 0.01
SNCA-205ENST00000394991 SCN2AQ99250 2005 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 TSPY26PQ9H489 355 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 ENAMQ9NRM1 1142 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 SPTLC3Q9NUV7 552 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 SMARCAL1Q9NZC9 954 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 IFNKQ9P0W0 207 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 ABI3Q9P2A4 366 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 PTGFRNQ9P2B2 879 aa15.13■□□□□ 0.01
SNCA-205ENST00000394991 DYTNA2CJ06 578 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 H7C0C1 242 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 MAP2K7O14733 419 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 PSTPIP1O43586 416 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 ABCB7O75027 752 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 WISP2O76076 250 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 PRR35P0CG20 571 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 COX6A1P12074 109 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 ATP5OP48047 213 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 GRM7Q14831 915 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 CDSNQ15517 529 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 YOD1Q5VVQ6 348 aaPredicted RBP15.12■□□□□ 0.01
SNCA-205ENST00000394991 NLRP9Q7RTR0 991 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 TAX1BP1Q86VP1 789 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 KBTBD2Q8IY47 623 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 SIRT6Q8N6T7 355 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 STT3BQ8TCJ2 826 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 DENND1AQ8TEH3 1009 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 HAS2Q92819 552 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 VPS50Q96JG6 964 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 IL17FQ96PD4 163 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 TBL1YQ9BQ87 522 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 GOLPH3Q9H4A6 298 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 ARNT2Q9HBZ2 717 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 NLE1Q9NVX2 485 aaPredicted RBP15.12■□□□□ 0.01
SNCA-205ENST00000394991 SEC14L3Q9UDX4 400 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 CIDEBQ9UHD4 219 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 HEATR5BQ9P2D3 2071 aa15.12■□□□□ 0.01
SNCA-205ENST00000394991 SPG11Q96JI7 2443 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 FITM1A5D6W6 292 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 USP1O94782 785 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 FTH1P02794 183 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 CELA2AP08217 269 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 RAB28P51157 221 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 CACNG1Q06432 222 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 GRB7Q14451 532 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 ANKRD20A2Q5SQ80 823 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 ANKRD20A1Q5TYW2 823 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 ANKRD20A3Q5VUR7 823 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 ATG9BQ674R7 924 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 MTFR2Q6P444 385 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 FIGLAQ6QHK4 219 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 ARHGEF18Q6ZSZ5 1173 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 BBS12Q6ZW61 710 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 AMER2Q8N7J2 671 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 TTC29Q8NA56 475 aaPredicted RBP15.11■□□□□ 0.01
SNCA-205ENST00000394991 CCDC110Q8TBZ0 833 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 CDKN2AIPNLQ96HQ2 116 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 SELENOSQ9BQE4 189 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
SNCA-205ENST00000394991 C3orf18Q9UK00 162 aa15.11■□□□□ 0.01
SNCA-205ENST00000394991 AAR2Q9Y312 384 aaKnown RBP15.11■□□□□ 0.01
SNCA-205ENST00000394991 APOC4-APOC2K7ER74 178 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 KCNN4O15554 427 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 PRICKLE3O43900 615 aaPredicted RBP15.1■□□□□ 0.01
SNCA-205ENST00000394991 AKR1B10O60218 316 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 CTSVO60911 334 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 APOC2P02655 101 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 ZGLP1P0C6A0 271 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 SSTR2P30874 369 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 NSG1P42857 185 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 KIR3DL1P43629 444 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 CARSP49589 748 aaKnown RBP15.1■□□□□ 0.01
SNCA-205ENST00000394991 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
SNCA-205ENST00000394991 VSX2P58304 361 aaPredicted RBP15.1■□□□□ 0.01
SNCA-205ENST00000394991 ITIH4Q14624 930 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 SYTL3Q4VX76 610 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 ZC3H12BQ5HYM0 836 aaKnown RBP15.1■□□□□ 0.01
SNCA-205ENST00000394991 TCTE1Q5JU00 501 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 XKRXQ6PP77 449 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 SPNS3Q6ZMD2 512 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 LAPTM4BQ86VI4 370 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 TMTC1Q8IUR5 882 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 CCDC50Q8IVM0 306 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 KLHDC8BQ8IXV7 354 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 KATNAL2Q8IYT4 538 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 RNF214Q8ND24 703 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 MIEF2Q96C03 454 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 CHP1Q99653 195 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 HEMGNQ9BXL5 484 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 ZNF304Q9HCX3 659 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 IL1RAPL1Q9NZN1 696 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.1■□□□□ 0.01
SNCA-205ENST00000394991 IMPACTQ9P2X3 320 aa15.1■□□□□ 0.01
SNCA-205ENST00000394991 NSG1A0A0A6YYJ2 146 aa15.09■□□□□ 0.01
SNCA-205ENST00000394991 OR51F1A6NGY5 319 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms