RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CHST9Q7L1S5 443 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 GALNT5Q7Z7M9 940 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 CLDN19Q8N6F1 224 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 MCOLN3Q8TDD5 553 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 USP7Q93009 1102 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 PYURFQ96I23 114 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 BARD1Q99728 777 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 TTLL2Q9BWV7 592 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 MRPL9Q9BYD2 267 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 ERVK-18Q9QC07 812 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 MTRRQ9UBK8 725 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 DAPK2Q9UIK4 370 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 ORC6Q9Y5N6 252 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 H0Y626 953 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 KPNA4O00629 521 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 ERN1O75460 977 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 TRIM16O95361 564 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 PRAMEF1O95521 474 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 ANGPTL1O95841 491 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 GSNP06396 782 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 MYCLP1P12525 358 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 OXA1LQ15070 435 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 LRIF1Q5T3J3 769 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 LAIR1Q6GTX8 287 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 FUT10Q6P4F1 479 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 OTOP2Q7RTS6 562 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 SLCO6A1Q86UG4 719 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 CYP4Z1Q86W10 505 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 UBTD2Q8WUN7 234 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 MTFMTQ96DP5 389 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 CEP295NLQ96MC4 621 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 INPP5KQ9BT40 448 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 NTMT1Q9BV86 223 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 MROQ9BYG7 248 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 HMG20AQ9NP66 347 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 AASSQ9UDR5 926 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 INTS6Q9UL03 887 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 M0QX08 132 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 COCHO43405 550 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 STC2O76061 302 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 RECQL5O94762 991 aaPredicted RBP17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 B3GALT4O96024 378 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 EBLN1P0CF75 366 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 BMP1P13497 986 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 HOXB9P17482 250 aaPredicted RBP17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 DGKAP23743 735 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 ACVR2AP27037 513 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 CD6P30203 668 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 FMO3P31513 532 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 HPCAL1P37235 193 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 WDR5P61964 334 aaKnown RBP17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 ACOX1Q15067 660 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 ATXN7L2Q5T6C5 722 aaPredicted RBP17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 CPZQ66K79 652 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 SHQ1Q6PI26 577 aaKnown RBP17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 MBOAT1Q6ZNC8 495 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 WBP2Q969T9 261 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 TAMM41Q96BW9 452 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 CDK5RAP1Q96SZ6 601 aaKnown RBP17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 KCNH6Q9H252 994 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 CWH43Q9H720 699 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 DLGAP4Q9Y2H0 992 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 CEP290O15078 2479 aa17.89■□□□□ 0.45
PCDHA1-202ENST00000394633 A0A096LPI6 279 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 IGFBP5P24593 272 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 MAP2K4P45985 399 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 RPS14P62263 151 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ADPRMQ3LIE5 342 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 CARD16Q5EG05 197 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 B3GNT8Q7Z7M8 397 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ZDHHC21Q8IVQ6 265 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 PIK3C3Q8NEB9 887 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 NDNFQ8TB73 568 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ZFP90Q8TF47 636 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ULK4Q96C45 1275 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 VMP1Q96GC9 406 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 VN1R3Q9BXE9 311 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 WDR12Q9GZL7 423 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 MAN2B2Q9Y2E5 1009 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 KRBA1A5PL33 1030 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 MZF1P28698 734 aaPredicted RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 PTPN6P29350 595 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 CDKN2CP42773 168 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 MAGEA2P43356 314 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 RXRGP48443 463 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 LAPTM4AQ15012 233 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ZNF551Q7Z340 670 aaPredicted RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ANKRD46Q86W74 232 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 RBFAQ8N0V3 343 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ZBTB2Q8N680 514 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 OR7A2PQ8NGA2 310 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 REXO5Q96IC2 774 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ACPTQ9BZG2 426 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ASB8Q9H765 288 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 RC3H2Q9HBD1 1191 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 FCF1Q9Y324 198 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 PCDHGA10Q9Y5H3 936 aa17.88■□□□□ 0.45
PCDHA1-202ENST00000394633 ABHD14A-ACY1A0A1B0GW23 586 aa17.87■□□□□ 0.45
PCDHA1-202ENST00000394633 PER2O15055 1255 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms