RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 GRIK2Q13002 908 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 DMC1Q14565 340 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 TBCELQ5QJ74 424 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 TECPR1Q7Z6L1 1165 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 VN1R2Q8NFZ6 395 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 UBTD2Q8WUN7 234 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 TRIM54Q9BYV2 358 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 VCXQ9H320 206 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 RPF2Q9H7B2 306 aaKnown RBP16.72■□□□□ 0.27
PDX1-201ENST00000381033 GULP1Q9UBP9 304 aa16.72■□□□□ 0.27
PDX1-201ENST00000381033 C15orf38-AP3S2A0A0A6YYH1 394 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 DHRS12A0PJE2 317 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 SOCS2O14508 198 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 CAPNS1P04632 268 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 HNRNPA1P09651 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDX1-201ENST00000381033 CBSLP0DN79 551 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 CYP2A6P11509 494 aaPredicted RBP16.71■□□□□ 0.27
PDX1-201ENST00000381033 ZNF30P17039 623 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 HOXA9P31269 272 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 CBSP35520 551 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 CYP51A1Q16850 503 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 ARPINQ7Z6K5 226 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 CELF5Q8N6W0 485 aaKnown RBP16.71■□□□□ 0.27
PDX1-201ENST00000381033 AP2M1Q96CW1 435 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 LRTM1Q9HBL6 345 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 TSC22D4Q9Y3Q8 395 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 C2orf16Q68DN1 1984 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 A0A0J9YVX5 310 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 GFYI3L273 518 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 RGS14O43566 566 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 LRATO95237 230 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 HIST1H2AGP0C0S8 130 aaPredicted RBP16.71■□□□□ 0.27
PDX1-201ENST00000381033 HIST1H2ADP20671 130 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 HRH2P25021 359 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 MMP12P39900 470 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 GNPDA1P46926 289 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 PHC1P78364 1004 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 GAB4Q2WGN9 574 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 PYCR3Q53H96 274 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 COQ5Q5HYK3 327 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 TMTC4Q5T4D3 741 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 IYDQ6PHW0 289 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 OSCP1Q8WVF1 389 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 SELENOMQ8WWX9 145 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 SGCDQ92629 289 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 USP7Q93009 1102 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 HIST1H2AHQ96KK5 128 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 BTBD9Q96Q07 612 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 SEPHS2Q99611 448 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 HIST1H2AJQ99878 128 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 H2AFJQ9BTM1 129 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 ACTR3BQ9P1U1 418 aa16.71■□□□□ 0.27
PDX1-201ENST00000381033 NOSIPQ9Y314 301 aaKnown RBP16.71■□□□□ 0.27
PDX1-201ENST00000381033 CXorf51AA0A1B0GTR3 108 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 ARHGAP10A1A4S6 786 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 ARHGEF33A8MVX0 844 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 CD22P20273 847 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 PBX2P40425 430 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 NRIP1P48552 1158 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 MRPL19P49406 292 aaKnown RBP16.7■□□□□ 0.26
PDX1-201ENST00000381033 PFN3P60673 137 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 TRIM46Q7Z4K8 759 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 ANKRD46Q86W74 232 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 ADGRG5Q8IZF4 528 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 C10orf111Q8N326 155 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 BTN2A2Q8WVV5 523 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 AURKBQ96GD4 344 aaPredicted RBP16.7■□□□□ 0.26
PDX1-201ENST00000381033 APIPQ96GX9 242 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 PPP3R2Q96LZ3 170 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 TSSK3Q96PN8 268 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 CCM2LQ9NUG4 571 aaPredicted RBP16.7■□□□□ 0.26
PDX1-201ENST00000381033 TMA7Q9Y2S6 64 aaKnown RBP16.7■□□□□ 0.26
PDX1-201ENST00000381033 PLXNA2O75051 1894 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 PGM3O95394 542 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 BCKDHAP12694 445 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 BDKRB1P46663 353 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 SLC6A12P48065 614 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 PRKCQQ04759 706 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 TMEM115Q12893 351 aaPredicted RBP16.7■□□□□ 0.26
PDX1-201ENST00000381033 WDR45BQ5MNZ6 344 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 C6orf183Q5T699 404 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 PRMT9Q6P2P2 845 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 NPAS3Q8IXF0 933 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 RAVER1Q8IY67 606 aaKnown RBP16.7■□□□□ 0.26
PDX1-201ENST00000381033 SCAIQ8N9R8 606 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 TSPEARQ8WU66 669 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 TRPS1Q9UHF7 1281 aa16.7■□□□□ 0.26
PDX1-201ENST00000381033 C5orf67F2Z3F1 127 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 PLOD2O00469 737 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 LCN8Q6JVE9 175 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 TMEM220Q6QAJ8 160 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 EPHX4Q8IUS5 362 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 HID1Q8IV36 788 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 ETFBKMTQ8IXQ9 262 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 PHACTR4Q8IZ21 702 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 FGF13Q92913 245 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 GLYATL1Q969I3 302 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 ZUFSPQ96AP4 578 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 ARRDC3Q96B67 414 aa16.69■□□□□ 0.26
PDX1-201ENST00000381033 UQCC2Q9BRT2 126 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms