RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 IL21RQ9HBE5 538 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 POT1Q9NUX5 634 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 UCKL1Q9NWZ5 548 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 CIDEBQ9UHD4 219 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 POLG2Q9UHN1 485 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 CSNK1G3Q9Y6M4 447 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 ANKRD12Q6UB98 2062 aa17■□□□□ 0.31
PFDN6-201ENST00000374606 YY2O15391 372 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 FLRT2O43155 660 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 ZIC2O95409 532 aaPredicted RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 SERPINE1P05121 402 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 EEF1DP29692 281 aaKnown RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 HERVK_113P63132 956 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 SHBQ15464 509 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 DEFB133Q30KQ1 61 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 TTC19Q6DKK2 380 aaPredicted RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 ZCCHC23Q6ZST2 131 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 NAGSQ8N159 534 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 GALNT15Q8N3T1 639 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 SFRP1Q8N474 314 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 CCNYL1Q8N7R7 359 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 MAPK15Q8TD08 544 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 UBTD2Q8WUN7 234 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 L3HYPDHQ96EM0 354 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 TMEM79Q9BSE2 394 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 RAB11FIP5Q9BXF6 653 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 ERVK-6Q9BXR3 956 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 STN1Q9H668 368 aaKnown RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 TOR4AQ9NXH8 423 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 SPATA7Q9P0W8 599 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 STOX2Q9P2F5 926 aaPredicted RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 ZNF624Q9P2J8 865 aaPredicted RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 PCDHGB2Q9Y5G2 931 aa16.99■□□□□ 0.31
PFDN6-201ENST00000374606 TNPO3Q9Y5L0 923 aaKnown RBP16.99■□□□□ 0.31
PFDN6-201ENST00000374606 TRBV23OR9-2A0A075B6M9 112 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 DKK1O94907 266 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 SIX3O95343 332 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-201ENST00000374606 SLC16A8O95907 504 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 VIPP01282 170 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 IMPA1P29218 277 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 SLC19A1P41440 591 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 CYP4F3Q08477 520 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 BNIP3Q12983 259 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 GRB7Q14451 532 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 CFAP157Q5JU67 520 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 ATG16L1Q676U5 607 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 SLC9B2Q86UD5 537 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 AVL9Q8NBF6 648 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 RHBDD1Q8TEB9 315 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 SLC37A2Q8TED4 501 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 PATE1Q8WXA2 126 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 GATA5Q9BWX5 397 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-201ENST00000374606 CAPS2Q9BXY5 557 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 KIR3DX1Q9H7L2 352 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 MANSC1Q9H8J5 431 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 LNPEPQ9UIQ6 1025 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 PTBP2Q9UKA9 531 aaKnown RBP16.98■□□□□ 0.31
PFDN6-201ENST00000374606 PLAGL1Q9UM63 463 aa16.98■□□□□ 0.31
PFDN6-201ENST00000374606 CABIN1Q9Y6J0 2220 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 A0A087WV48 116 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 TRABD2BA6NFA1 517 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 TAPBPO15533 448 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 SUPT7LO94864 414 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 RPS17P08708 135 aaKnown RBP16.97■□□□□ 0.31
PFDN6-201ENST00000374606 XRCC1P18887 633 aaPredicted RBP16.97■□□□□ 0.31
PFDN6-201ENST00000374606 IMPDH1P20839 514 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 GRK2P25098 689 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 HSD17B2P37059 387 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 HSPA7P48741 367 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 AGTR2P50052 363 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 NAGLUP54802 743 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 NAA20P61599 178 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 GNGT1P63211 74 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 UBE2IP63279 158 aaKnown RBP16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ARHGAP19Q14CB8 494 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 PCBP2Q15366 365 aaKnown RBP eCLIP16.97■□□□□ 0.314e-7■■■■□ 19.9
PFDN6-201ENST00000374606 C18orf21Q32NC0 220 aaPredicted RBP16.97■□□□□ 0.31
PFDN6-201ENST00000374606 FBXO48Q5FWF7 155 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ZNF678Q5SXM1 525 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ANKS6Q68DC2 871 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 AGTRAPQ6RW13 159 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 SYTL1Q8IYJ3 562 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 OR52E1Q8NGJ3 308 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 PPP4R1Q8TF05 950 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ZNF480Q8WV37 535 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ZNF75CPQ92670 426 aaPredicted RBP16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ATG10Q9H0Y0 220 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 CCDC134Q9H6E4 229 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 CPNE7Q9UBL6 633 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 KNL1Q8NG31 2342 aa16.97■□□□□ 0.31
PFDN6-201ENST00000374606 ARHGEF17Q96PE2 2063 aaPredicted RBP16.97■□□□□ 0.31
PFDN6-201ENST00000374606 PRAMEF33A0A0G2JMD5 474 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 LRRC14BA6NHZ5 514 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 ZNF839A8K0R7 811 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 TMEM114B3SHH9 223 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 KLF11O14901 512 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
PFDN6-201ENST00000374606 ALPPL2P10696 532 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 PKLRP30613 574 aa16.96■□□□□ 0.31
PFDN6-201ENST00000374606 SERPINB5P36952 375 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms