RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF852Q6ZMS4 543 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 KCTD8Q6ZWB6 473 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF554Q86TJ5 538 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 PLD3Q8IV08 490 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 TMEM139Q8IV31 216 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 NAGSQ8N159 534 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 RASGEF1AQ8N9B8 481 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 UXS1Q8NBZ7 420 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 DBF4BQ8NFT6 615 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 OR2T12Q8NG77 320 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 GRHL3Q8TE85 626 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF473Q8WTR7 871 aaKnown RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 NUDCD2Q8WVJ2 157 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 HSD17B8Q92506 261 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 PROX1Q92786 737 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 TEKT1Q969V4 418 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 IGSF21Q96ID5 467 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 FAM71F1Q96KD3 344 aaPredicted RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 FAM20AQ96MK3 541 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 RTP3Q9BQQ7 232 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 TRAF4Q9BUZ4 470 aaPredicted RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 C1QTNF4Q9BXJ3 329 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 C6orf106Q9H6K1 298 aaPredicted RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ADPRHL2Q9NX46 363 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 SEPT10Q9P0V9 454 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZDHHC2Q9UIJ5 367 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC7A7Q9UM01 511 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 PCSK5Q92824 1860 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 CACNA1IQ9P0X4 2223 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 TRIM64A6NGJ6 449 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 TRIM64BA6NI03 449 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 SDR42E2A6NKP2 422 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 INSIG1O15503 277 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 ST8SIA3O43173 380 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PPIP5K2O43314 1243 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC28A2O43868 658 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 XPNPEP2O43895 674 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PAPSS2O95340 614 aaPredicted RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 C9P02748 559 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 SNRNP70P08621 437 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 FGF5P12034 268 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PLA2G2AP14555 144 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 LBPP18428 481 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 MSH3P20585 1137 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 JAK1P23458 1154 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 HNF4AP41235 474 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 KCNJ1P48048 391 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 KHKP50053 298 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 FOXG1P55316 489 aaPredicted RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 SNU13P55769 128 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 B3GALT5-AS1P59052 145 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 STX1BP61266 288 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 ILF2Q12905 390 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 ODF4Q2M2E3 257 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 ITPRIPL2Q3MIP1 535 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 KBTBD12Q3ZCT8 623 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PHLDA2Q53GA4 152 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF789Q5FWF6 425 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PDSS1Q5T2R2 415 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 CAPRIN2Q6IMN6 1127 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 CYB5D1Q6P9G0 228 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PRSS57Q6UWY2 283 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 IL17RELQ6ZVW7 336 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PHLDB2Q86SQ0 1253 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 FOXP4Q8IVH2 680 aaPredicted RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 NAT8LQ8N9F0 302 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 Q8N9P0 234 aaPredicted RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 OR11H4Q8NGC9 324 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 OR4K1Q8NGD4 311 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 OLIG1Q8TAK6 271 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 SECTM1Q8WVN6 248 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 P2RX5Q93086 422 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 SNRNP40Q96DI7 357 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 THOC1Q96FV9 657 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 BSCL2Q96G97 398 aaPredicted RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 CCDC43Q96MW1 224 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 MEIS3Q99687 375 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 MIS12Q9H081 205 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 S1PR5Q9H228 398 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 A4GALTQ9NPC4 353 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 DNAJC17Q9NVM6 304 aaKnown RBP3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 CNIH4Q9P003 139 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 CACNG4Q9UBN1 327 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 DAPK2Q9UIK4 370 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 TMED3Q9Y3Q3 217 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 JRKLQ9Y4A0 524 aa3.47□□□□□ -1.85
RNU6-28P-201ENST00000362378 PLSCR5A0PG75 271 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 FLRT2O43155 660 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PRKNO60260 465 aaPredicted RBP3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PRAF2O60831 178 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PRKRAO75569 313 aaKnown RBP3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 RPS6KA5O75582 802 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PIGNO95427 931 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 SLC16A8O95907 504 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 PLGP00747 810 aaPredicted RBP3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 ITIH1P19827 911 aa3.46□□□□□ -1.86
RNU6-28P-201ENST00000362378 NR1D1P20393 614 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms