RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 AGTRAPQ6RW13 159 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 ANGPTL8Q6UXH0 198 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 MBOAT1Q6ZNC8 495 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 CHCHD4Q8N4Q1 142 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 OR52E1Q8NGJ3 308 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 FBXL8Q96CD0 374 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 ARMC7Q9H6L4 198 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 RDH14Q9HBH5 336 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 TMBIM4Q9HC24 238 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 SELENONQ9NZV5 590 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 KCND3Q9UK17 655 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 NXT1Q9UKK6 140 aaKnown RBP8.93□□□□□ -0.98
UPF2-202ENST00000357604 RAB21Q9UL25 225 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 PCDHGA1Q9Y5H4 931 aa8.93□□□□□ -0.98
UPF2-202ENST00000357604 CAPN5O15484 640 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 ULK1O75385 1050 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 HSD11B2P80365 405 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 OLIG2Q13516 323 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 BHLHB9Q6PI77 547 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 PAQR3Q6TCH7 311 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 ALYREFQ86V81 257 aaKnown RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 RASGEF1AQ8N9B8 481 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 KIAA1191Q96A73 305 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 RGMAQ96B86 450 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 SLC12A9Q9BXP2 914 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 TRIM15Q9C019 465 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 RHBGQ9H310 441 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 STX16-NPEPL1H3BU86 382 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 STX16O14662 325 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 CSRP1P21291 193 aaKnown RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 CD9P21926 228 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 LHCGRP22888 699 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 GPC1P35052 558 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 BTKQ06187 659 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 TMEM71Q6P5X7 295 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 FIGLAQ6QHK4 219 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 TIFABQ6ZNK6 161 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 TMPRSS12Q86WS5 348 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 C2orf73Q8N5S3 287 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 PTCD3Q96EY7 689 aaKnown RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 PGM2Q96G03 612 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 KLF6Q99612 283 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 FGF22Q9HCT0 170 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 C1GALT1Q9NS00 363 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 PISDQ9UG56 409 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 C5orf58C9J3I9 102 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 NRG2O14511 850 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 LILRB5O75023 590 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 CPNE3O75131 537 aaKnown RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 CEACAM5P06731 702 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 CHRM5P08912 532 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 NCF2P19878 526 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 AOAHP28039 575 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 RASSF2P50749 326 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 DMPKQ09013 629 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 STX4Q12846 297 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 TOR1AIP1Q5JTV8 583 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 IYDQ6PHW0 289 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 TNIP2Q8NFZ5 429 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 EEF1AKMT1Q8WVE0 214 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 FCRL3Q96P31 734 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 ZIM3Q96PE6 472 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 SEMA6CQ9H3T2 930 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 CAB39LQ9H9S4 337 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 XPR1Q9UBH6 696 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 PLAGL1Q9UM63 463 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 LOXL2Q9Y4K0 774 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 POM121BA6NF01 834 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 ZSCAN9O15535 394 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 CCDC22O60826 627 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 CSO75390 466 aaKnown RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 AHSGP02765 367 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 RRADP55042 308 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 CDKL1Q00532 357 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 MEF2AQ02078 507 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 LRRC74AQ0VAA2 488 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 METRNLQ641Q3 311 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 USP53Q70EK8 1073 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 SEC16BQ96JE7 1060 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 INSM2Q96T92 566 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 DPH2Q9BQC3 489 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 ACAT2Q9BWD1 397 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 PITPNM3Q9BZ71 974 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 ACTR5Q9H9F9 607 aaPredicted RBP8.92□□□□□ -0.98
UPF2-202ENST00000357604 TEKT2Q9UIF3 430 aa8.92□□□□□ -0.98
UPF2-202ENST00000357604 SEC22BO75396 215 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 ABCG1P45844 678 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 KCNK10P57789 538 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 ACVR1Q04771 509 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 TAF11Q15544 211 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 ACSBG2Q5FVE4 666 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 LIPJQ5W064 366 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 C19orf47Q8N9M1 422 aaKnown RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 RIT1Q92963 219 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 IP6K3Q96PC2 410 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 SHCBP1LQ9BZQ2 653 aa8.91□□□□□ -0.98
UPF2-202ENST00000357604 IFT80Q9P2H3 777 aaPredicted RBP8.91□□□□□ -0.98
UPF2-202ENST00000357604 OAS3Q9Y6K5 1087 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms