RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ANK1P16157 1881 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TRIP12Q14669 1992 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CCL15-CCL14A0A0B4J2E2 113 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 MANSC4A6NHS7 340 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 SNTNA6NMZ2 147 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 ZNF99A8MXY4 864 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 KCNU1A8MYU2 1149 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 G3V2L1 256 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PDHXO00330 501 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 APOL1O14791 398 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 HAT1O14929 419 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 EXTL3O43909 919 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 NDUFS2O75306 463 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 LRCH4O75427 683 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 ENDOD1O94919 500 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 GABARAPO95166 117 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 IL18RAPO95256 599 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PIGNO95427 931 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 SEC24AO95486 1093 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TOP3BO95985 862 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 HPRP00739 348 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 LDLRP01130 860 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 APRTP07741 180 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TRAPPC2P0DI81 140 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TRAPPC2BP0DI82 140 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 MYCLP12524 364 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 HSD17B1P14061 328 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 POLR2CP19387 275 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 EIF2DP41214 584 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 ALDH7A1P49419 539 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PRIM2P49643 509 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 RABGGTBP53611 331 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 MAPK10P53779 464 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CTAG1AP78358 180 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PPP2R2BQ00005 443 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 IFITM3Q01628 133 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 AQP6Q13520 282 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 FASTKQ14296 549 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 FRG1Q14331 258 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 GALNT3Q14435 633 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 KCTD2Q14681 263 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 NPTX1Q15818 432 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CCL15Q16663 113 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TYSND1Q2T9J0 566 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CYBRD1Q53TN4 286 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PAGE2BQ5JRK9 111 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 AGAP6Q5VW22 663 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TTC23Q5W5X9 447 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 XAF1Q6GPH4 301 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 ZNF585AQ6P3V2 769 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 SLC16A12Q6ZSM3 486 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 C14orf80Q86SX3 495 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 EPHX4Q8IUS5 362 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 SPARTQ8N0X7 666 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 D2HGDHQ8N465 521 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 Q8N9G6 341 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 FAM156AQ8NDB6 213 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 TRPV3Q8NET8 790 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 GPRC5AQ8NFJ5 357 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 MDGA1Q8NFP4 955 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 RHOXF1Q8NHV9 184 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CANT1Q8WVQ1 401 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PROX1Q92786 737 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 FKBP10Q96AY3 582 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 ERLEC1Q96DZ1 483 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 AGAP4Q96P64 663 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CSF3RQ99062 836 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PARK7Q99497 189 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 HOPXQ9BPY8 73 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CHID1Q9BWS9 393 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 KCNH6Q9H252 994 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 WDR55Q9H6Y2 383 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 LRRC4Q9HBW1 653 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 MRM3Q9HC36 420 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 NMRK2Q9NPI5 230 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 EIF2B3Q9NR50 452 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 SNX15Q9NRS6 342 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 DDX28Q9NUL7 540 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 ZNF639Q9UID6 485 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 MTF2Q9Y483 593 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 PCDHA10Q9Y5I2 948 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 DGKBQ9Y6T7 804 aa7.54□□□□□ -1.2
UBE2D3-204ENST00000349311 CITO14578 2027 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 IGKV6D-21A0A0A0MT36 114 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 MAGEB16A2A368 324 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 ZSCAN5BA6NJL1 495 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 ASB14A6NK59 587 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 CENPXA8MT69 81 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 A8MU76 341 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 ZNF487B1APH4 448 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 TNPO2O14787 897 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 POLR1CO15160 346 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 MED7O43513 233 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 TBC1D4O60343 1298 aa7.53□□□□□ -1.2
UBE2D3-204ENST00000349311 GPC4O75487 556 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms