RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMEM52BQ4KMG9 183 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 XKR6Q5GH73 641 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 NANOGP8Q6NSW7 305 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 AAGABQ6PD74 315 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ANKRD46Q86W74 232 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ZFAND4Q86XD8 727 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 C10orf111Q8N326 155 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PCYOX1LQ8NBM8 494 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 OR5AR1Q8NGP9 310 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PPP2R3CQ969Q6 453 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 NEIL2Q969S2 332 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ASB9Q96DX5 294 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 APOLD1Q96LR9 279 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ACAT2Q9BWD1 397 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 HDAC8Q9BY41 377 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 RSPH9Q9H1X1 276 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ELOVL6Q9H5J4 265 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 IKZF5Q9H5V7 419 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 NANOGQ9H9S0 305 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 LRTM1Q9HBL6 345 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 DNAJC11Q9NVH1 559 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 VAPAQ9P0L0 249 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ERVK-11Q9UQG0 969 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 C1QTNF3-AMACRE9PGA6 284 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 IFRD1O00458 451 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 KPNA5O15131 536 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 DFNA5O60443 496 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 HNMTP50135 292 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 CDK3Q00526 305 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 CDKL1Q00532 357 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 IRF8Q02556 426 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 CAMK2GQ13555 558 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 STARD3Q14849 445 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PDCD4Q53EL6 469 aaKnown RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 DUS1LQ6P1R4 473 aaKnown RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 SYTL1Q8IYJ3 562 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 KIAA1958Q8N8K9 716 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 IL17RCQ8NAC3 791 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF740Q8NDX6 193 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 OR14C36Q8NHC7 312 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 GANCQ8TET4 914 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 CANT1Q8WVQ1 401 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 LRTOMTQ8WZ04 291 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 TMEM125Q96AQ2 219 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 AURKBQ96GD4 344 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 HIC2Q96JB3 615 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 SPNS1Q9H2V7 528 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 FBXL12Q9NXK8 326 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 TRPS1Q9UHF7 1281 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ANGPTL2Q9UKU9 493 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PCDHGB4Q9UN71 923 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 CA5BQ9Y2D0 317 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PCDHGB5Q9Y5G0 923 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 V9GYQ6 96 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 TICRRQ7Z2Z1 1910 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 KIAA1549LQ6ZVL6 1849 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 A0A1W2PQF6 199 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 FAM234BA2RU67 622 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF839A8K0R7 811 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 MAGEB17A8MXT2 336 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 EIF3FO00303 357 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 RGS14O43566 566 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 AKAP10O43572 662 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 EEDO75530 441 aaKnown RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 MT-ND1P03886 318 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 GBAP04062 536 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 GSNP06396 782 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ASGR2P07307 311 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ENO2P09104 434 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 NPPBP16860 134 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 OXTRP30559 389 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 AP1S2P56377 157 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 NAA20P61599 178 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 RPS14P62263 151 aaKnown RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ENPP2Q13822 863 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 USP39Q53GS9 565 aaKnown RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 FRG2Q64ET8 278 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ANKRD26P1Q6NSI1 321 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 LRRC70Q7Z2Q7 622 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 EFL1Q7Z2Z2 1120 aaKnown RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 AMIGO2Q86SJ2 522 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 PQLC1Q8N2U9 271 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 MINDY1Q8N5J2 469 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 L3MBTL4Q8NA19 623 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 GLMNQ92990 594 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ROPN1LQ96C74 230 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 FBXL8Q96CD0 374 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 FRG2BQ96QU4 278 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ZNF184Q99676 751 aaPredicted RBP7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 MFRPQ9BY79 579 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ZDHHC5Q9C0B5 715 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 RAD18Q9NS91 495 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 C1orf109Q9NX04 203 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ZIM2Q9NZV7 527 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 ABCD2Q9UBJ2 740 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 LIMD1Q9UGP4 676 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 WDR37Q9Y2I8 494 aa7.18□□□□□ -1.26
SRFBP1-201ENST00000339397 SAP18O00422 153 aaKnown RBP7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 SLC31A1O15431 190 aa7.17□□□□□ -1.26
SRFBP1-201ENST00000339397 TPST1O60507 370 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms