RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 RMDN2Q96LZ7 410 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 FERD3LQ96RJ6 166 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 MIPEPQ99797 713 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 TMEM79Q9BSE2 394 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 NTMT1Q9BV86 223 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 PCBD2Q9H0N5 130 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 ZNF395Q9H8N7 513 aaPredicted RBP17.51■□□□□ 0.39
SYNE4-201ENST00000324444 IPPKQ9H8X2 491 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 SEMA4BQ9NPR2 832 aaPredicted RBP17.51■□□□□ 0.39
SYNE4-201ENST00000324444 PNPOQ9NVS9 261 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 GPRC5BQ9NZH0 403 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 STOX2Q9P2F5 926 aaPredicted RBP17.51■□□□□ 0.39
SYNE4-201ENST00000324444 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
SYNE4-201ENST00000324444 AZIN1O14977 448 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 BCAT2O15382 392 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 ZFC3H1O60293 1989 aaKnown RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 UGDHO60701 494 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 WDR47O94967 919 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 WNT1P04628 370 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 UROSP10746 265 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 CSRP1P21291 193 aaKnown RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 MPSTP25325 297 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 RPL10P27635 214 aaKnown RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 BDKRB1P46663 353 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 EIF2B5Q13144 721 aaKnown RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 ELOCQ15369 112 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 PTCHD3Q3KNS1 767 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 ACAD11Q709F0 780 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 SYTL1Q8IYJ3 562 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 PHACTR4Q8IZ21 702 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 MINDY1Q8N5J2 469 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 OR56A3Q8NH54 315 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 AGAP11Q8TF27 550 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 CNTNAP3BQ96NU0 1288 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 PCDH15Q96QU1 1955 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 CNTNAP3Q9BZ76 1288 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 NOL11Q9H8H0 719 aaKnown RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 EPG5Q9HCE0 2579 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 MARCOQ9UEW3 520 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-201ENST00000324444 ZDHHC2Q9UIJ5 367 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 DCTN4Q9UJW0 460 aa17.5■□□□□ 0.39
SYNE4-201ENST00000324444 CEP295Q9C0D2 2601 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 CLGNO14967 610 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 CCDC22O60826 627 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 VPS4BO75351 444 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 SLC16A8O95907 504 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 CSF2P04141 144 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 MTHFD1P11586 935 aaKnown RBP17.49■□□□□ 0.39
SYNE4-201ENST00000324444 F3P13726 295 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 ARRB2P32121 409 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 ARL1P40616 181 aaPredicted RBP17.49■□□□□ 0.39
SYNE4-201ENST00000324444 PNLIPRP1P54315 467 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 HNRNPKP61978 463 aaKnown RBP eCLIP17.49■□□□□ 0.39
SYNE4-201ENST00000324444 SH3BP2P78314 561 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 METTL21CQ5VZV1 264 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 MILR1Q7Z6M3 343 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 SNX31Q8N9S9 440 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 DEFB124Q8NES8 71 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 C10orf82Q8WW14 230 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 CCT6BQ92526 530 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 RILPQ96NA2 401 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 INSM2Q96T92 566 aaPredicted RBP17.49■□□□□ 0.39
SYNE4-201ENST00000324444 HAUS8Q9BT25 410 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 TMEM120AQ9BXJ8 343 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 TMEM168Q9H0V1 697 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 ERVMER34-1Q9H9K5 563 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 IMP3Q9NV31 184 aaKnown RBP17.49■□□□□ 0.39
SYNE4-201ENST00000324444 SPASTQ9UBP0 616 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 TRPS1Q9UHF7 1281 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 PNMA8BQ9ULN7 279 aaPredicted RBP17.49■□□□□ 0.39
SYNE4-201ENST00000324444 TRIM33Q9UPN9 1127 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 KCNE2Q9Y6J6 123 aa17.49■□□□□ 0.39
SYNE4-201ENST00000324444 KIR2DS5A0A0G2JLQ3 304 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 A0A0G2JNG1 304 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 KIR2DS3K7RE56 304 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 CEACAM1P13688 526 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 NME1P15531 152 aaKnown RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 JUNDP17535 347 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 IMPA1P29218 277 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 NXPH1P58417 271 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 IRX1P78414 480 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 ZNF33BQ06732 778 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 PCDH1Q08174 1060 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 NAE1Q13564 534 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 KIR2DS5Q14953 304 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 RPE65Q16518 533 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 THOC6Q86W42 341 aaKnown RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 GKN2Q86XP6 184 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 RBM12BQ8IXT5 1001 aaKnown RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 GBP7Q8N8V2 638 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 OR5AR1Q8NGP9 310 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 RFWD2Q8NHY2 731 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 CXorf40BQ96DE9 158 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 CCDC28BQ9BUN5 200 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 ZBTB26Q9HCK0 441 aa17.48■□□□□ 0.39
SYNE4-201ENST00000324444 CCDC177Q9NQR7 707 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 APOBEC3BQ9UH17 382 aaKnown RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 TDRKHQ9Y2W6 561 aaKnown RBP17.48■□□□□ 0.39
SYNE4-201ENST00000324444 DYRK1BQ9Y463 629 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms