RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NCF1CA8MVU1 366 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ARHGEF33A8MVX0 844 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 TAPBPO15533 448 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 SUPT7LO94864 414 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 TNFAIP8O95379 198 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 C1orf105O95561 183 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 CATP04040 527 aaKnown RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 HIST1H2AGP0C0S8 130 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 NCF1P14598 390 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 HIST1H2ADP20671 130 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 HNMTP50135 292 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 HK2P52789 917 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 THOP1P52888 689 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 EMP3P54852 163 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 NR1H2P55055 460 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 TBL3Q12788 808 aaKnown RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 OVGP1Q12889 678 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ABRQ12979 859 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 PRKAA1Q13131 559 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 PTK2BQ14289 1009 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ANKS6Q68DC2 871 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ENPP7Q6UWV6 458 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 CHST15Q7LFX5 561 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ERI1Q8IV48 349 aaKnown RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 SLC22A18ASQ8N1D0 253 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 OR13H1Q8NG92 308 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 C17orf50Q8WW18 174 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 HIST1H2AHQ96KK5 128 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 OR2M4Q96R27 311 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 HIST1H2AJQ99878 128 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 TMEM79Q9BSE2 394 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 H2AFJQ9BTM1 129 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ZDHHC5Q9C0B5 715 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ILKAPQ9H0C8 392 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 PLGRKTQ9HBL7 147 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 EML4Q9HC35 981 aaKnown RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ACSS2Q9NR19 701 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 SPATA6Q9NWH7 488 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-202ENST00000324340 ARL15Q9NXU5 204 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 PCTPQ9UKL6 214 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 DNAJC16Q9Y2G8 782 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 DGKBQ9Y6T7 804 aa12.41□□□□□ -0.42
DDX39A-202ENST00000324340 SPTY2D1-AS1A0A0U1RR47 76 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 SH3PXD2BA1X283 911 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 LRRC14BA6NHZ5 514 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 H3BNX3 289 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 M0R296 226 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 GUCA1CO95843 209 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 CLPTM1O96005 669 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 EIF2S1P05198 315 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 SMIM18P0DKX4 95 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 ACP5P13686 325 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 CCR10P46092 362 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 GNPDA1P46926 289 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 AGTR2P50052 363 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 RPL14P50914 215 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 SRP54P61011 504 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 RPL6Q02878 288 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 BTKQ06187 659 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 DMWDQ09019 674 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 LRP8Q14114 963 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 ALG11Q2TAA5 492 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 MMEL1Q495T6 779 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 WDR5BQ86VZ2 330 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 DCP2Q8IU60 420 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 ZNF781Q8N8C0 355 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 MFSD2AQ8NA29 543 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 RFWD2Q8NHY2 731 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 C1orf216Q8TAB5 229 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 FBXL8Q96CD0 374 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 CCDC138Q96M89 665 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 EGFL8Q99944 293 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 CD244Q9BZW8 370 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 DUSP15Q9H1R2 295 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 CARS2Q9HA77 564 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 TRNAU1APQ9NX07 287 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 C6orf203Q9P0P8 240 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 KLQ9UEF7 1012 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 PNMA8BQ9ULN7 279 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 ASB1Q9Y576 335 aa12.4□□□□□ -0.42
DDX39A-202ENST00000324340 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.4□□□□□ -0.42
DDX39A-202ENST00000324340 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ZFC3H1O60293 1989 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 A0A1W2PR77 199 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 SLCO1B7G3V0H7 640 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 H0YJX3 145 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ZNF701M0R085 212 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 MATN2O00339 956 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 UBFD1O14562 309 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ZNF195O14628 629 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 FGF4P08620 206 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 THEGLP0DJG4 465 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 BCKDHBP21953 392 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 MPSTP25325 297 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 MAP4P27816 1152 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 SLC6A12P48065 614 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms