RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TACR1P25103 407 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GPR1P46091 355 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 BDKRB1P46663 353 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CHN2P52757 468 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ERVK-21P61565 698 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 RPS14P62263 151 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 DDX39BQ13838 428 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 SMU1Q2TAY7 513 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GGTA1PQ4G0N0 100 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 AASDHQ4L235 1098 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 XKR6Q5GH73 641 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GLYATQ6IB77 296 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 UGT2A3Q6UWM9 527 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CYP2U1Q7Z449 544 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 THOC6Q86W42 341 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 NRSN1Q8IZ57 195 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ADGRG5Q8IZF4 528 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 TERB1Q8NA31 727 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GLB1L3Q8NCI6 653 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 TMIEQ8NEW7 156 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 GFM2Q969S9 779 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 APIPQ96GX9 242 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 EGLN2Q96KS0 407 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 APOLD1Q96LR9 279 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 MTERF1Q99551 399 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 SEPHS2Q99611 448 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CLMPQ9H6B4 373 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 SFXN1Q9H9B4 322 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 HPS4Q9NQG7 708 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 DYRK4Q9NR20 520 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 THG1LQ9NWX6 298 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 PDP2Q9P2J9 529 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 YBX2Q9Y2T7 364 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 CEP290O15078 2479 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 SAC3D1A6NKF1 404 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 E7EQ34 232 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 AREL1O15033 823 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 LRATO95237 230 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 MT-ND1P03886 318 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 EPHX1P07099 455 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 JUPP14923 745 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CD22P20273 847 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 FASP25445 335 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 HTR1EP28566 365 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 PRKCQQ04759 706 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 ELP6Q0PNE2 266 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 EIF4HQ15056 248 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 DUSP6Q16828 381 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 MARVELD2Q8N4S9 558 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 OR10A6Q8NH74 314 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 SUSD6Q92537 303 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 FBXL8Q96CD0 374 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 NUS1Q96E22 293 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 CCDC138Q96M89 665 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 FOPNLQ96NB1 174 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 TMEM245Q9H330 911 aa7.36□□□□□ -1.23
IFT88-201ENST00000319980 STOX2Q9P2F5 926 aaPredicted RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 CNOT11Q9UKZ1 510 aaKnown RBP7.36□□□□□ -1.23
IFT88-201ENST00000319980 ZNF106Q9H2Y7 1883 aaKnown RBP7.35□□□□□ -1.23
IFT88-201ENST00000319980 KANSL1LA0AUZ9 987 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PDLIM1O00151 329 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SH3BGRLO75368 114 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 GPIP06744 558 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 BMP2P12643 396 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 VAMP1P23763 118 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 HRH2P25021 359 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 IL12RB1P42701 662 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 HSPA13P48723 471 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 TSTA3Q13630 321 aaPredicted RBP7.35□□□□□ -1.23
IFT88-201ENST00000319980 KCNC3Q14003 757 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 GRM2Q14416 872 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SHHQ15465 462 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PRR23BQ6ZRT6 265 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ANKRD46Q86W74 232 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 DTWD1Q8N5C7 304 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 TRPV3Q8NET8 790 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PPP1R16AQ96I34 528 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PHOX2BQ99453 314 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PKP4Q99569 1192 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 MUC13Q9H3R2 512 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 AGPAT4Q9NRZ5 378 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 RNF103-CHMP3A0A140T963 221 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 TCRBV5S2A0A599 114 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SOCS2O14508 198 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 B3GALT4O96024 378 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 SDC1P18827 310 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PAX7P23759 505 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 CLDN8P56748 225 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PHC1P78364 1004 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 DOC2AQ14183 400 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PGS1Q32NB8 556 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 GTDC1Q4AE62 458 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 IYDQ6PHW0 289 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 TRMT11Q7Z4G4 463 aaKnown RBP7.35□□□□□ -1.23
IFT88-201ENST00000319980 NLRP8Q86W28 1048 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 PROSER1Q86XN7 944 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 RASGRP3Q8IV61 690 aa7.35□□□□□ -1.23
IFT88-201ENST00000319980 ST13P4Q8IZP2 240 aaPredicted RBP7.35□□□□□ -1.23
IFT88-201ENST00000319980 CBR4Q8N4T8 237 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms