RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ADAM8P78325 824 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 HSPB3Q12988 150 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ASB18Q6ZVZ8 466 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 OR8D1Q8WZ84 308 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DDX1Q92499 740 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 SLC9A6Q92581 669 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ZNF599Q96NL3 588 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 OXCT2Q9BYC2 517 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 FARSBQ9NSD9 589 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 TMLHEQ9NVH6 421 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 POLR3BQ9NW08 1133 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ARL5AQ9Y689 179 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 CPSF4LA6NMK7 179 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 PRAMEF12O95522 483 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 HLA-DQB2P05538 268 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 TFPTP0C1Z6 253 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 LMO2P25791 158 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ERP29P30040 261 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 GRIA2P42262 883 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DEFA5Q01523 94 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 EMX2Q04743 252 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ZNF33AQ06730 810 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DUOXA1Q1HG43 343 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 FAM91A1Q658Y4 838 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 QSOX2Q6ZRP7 698 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 IL4I1Q96RQ9 567 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 BCAS3Q9H6U6 928 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 USP29Q9HBJ7 922 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DCLK1O15075 740 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 APOC1P02654 83 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ZNF806P0C7X5 589 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 HMGCS1Q01581 520 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 SLC10A7Q0GE19 358 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 SEMA3AQ14563 771 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 CTC1Q2NKJ3 1217 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ATP13A5Q4VNC0 1218 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 C6orf141Q5SZD1 244 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 KLHL35Q6PF15 583 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 BTN2A1Q7KYR7 527 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 PHYKPLQ8IUZ5 450 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 KAT2AQ92830 837 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ZC3H10Q96K80 434 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 TMEM74Q96NL1 305 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 GTPBP2Q9BX10 602 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 CST11Q9H112 138 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 VPS29Q9UBQ0 182 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 FZD1Q9UP38 647 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 KANTRA0A1W2PQU2 76 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 A0A1W2PRB8 838 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 IRAK2O43187 625 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 CDRT1O95170 752 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 CLIC3O95833 236 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 NUDT6P53370 316 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DUSP4Q13115 394 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 GANABQ14697 944 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 GPR33Q49SQ1 333 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 UBAP2Q5T6F2 1119 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 MSANTD2Q6P1R3 559 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 SNX20Q7Z614 316 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 ANKFN1Q8N957 763 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 DNAJA4Q8WW22 397 aaPredicted RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 SMG7Q92540 1137 aaKnown RBP10.79□□□□□ -0.68
PBRM1-201ENST00000296302 CDK15Q96Q40 435 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 TTPALQ9BTX7 342 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 RDH8Q9NYR8 311 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 SPATA7Q9P0W8 599 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 GALPQ9UBC7 116 aa10.79□□□□□ -0.68
PBRM1-201ENST00000296302 MYBPHLA2RUH7 354 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 PCDH7O60245 1069 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 MMP3P08254 477 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CTSEP14091 401 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 EFNA1P20827 205 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-201ENST00000296302 DNASE1L1P49184 302 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 EIPR1Q53HC9 387 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 OR13C4Q8NGS5 318 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CREB3L1Q96BA8 519 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CDKN2AIPNLQ96HQ2 116 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 MRM3Q9HC36 420 aaKnown RBP10.78□□□□□ -0.68
PBRM1-201ENST00000296302 C14orf105Q9NVL8 296 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 MARK1Q9P0L2 795 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 ZFP37Q9Y6Q3 630 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CHP2O43745 196 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CD2P06729 351 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 AMD1P17707 334 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 HOXD13P35453 343 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 DGKZQ13574 1117 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 LRRC70Q7Z2Q7 622 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 SAMD14Q8IZD0 417 aaPredicted RBP10.78□□□□□ -0.68
PBRM1-201ENST00000296302 SCML4Q8N228 414 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CHST4Q8NCG5 386 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 ZNF563Q8TA94 476 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 NCSTNQ92542 709 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 CLIP3Q96DZ5 547 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 BCO2Q9BYV7 579 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 TXLNGYQ9BZA5 131 aa10.78□□□□□ -0.68
PBRM1-201ENST00000296302 UCK2Q9BZX2 261 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms