RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TFDP3Q5H9I0 405 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ANKRD20A2Q5SQ80 823 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ANKRD20A1Q5TYW2 823 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 AGAP7PQ5VUJ5 663 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ANKRD20A3Q5VUR7 823 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 FCRL6Q6DN72 434 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 ISLR2Q6UXK2 745 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 NAPRTQ6XQN6 538 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 TTLL10Q6ZVT0 673 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 FJX1Q86VR8 437 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 KATNAL2Q8IYT4 538 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 RCOR2Q8IZ40 523 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 DTWD1Q8N5C7 304 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 AMER2Q8N7J2 671 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 OR5K2Q8NHB8 316 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 KRT35Q92764 455 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 HAUS1Q96CS2 278 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 DNAJC1Q96KC8 554 aaKnown RBP5.86□□□□□ -1.47
VRK3-220ENST00000600259 AGAP4Q96P64 663 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 GBP4Q96PP9 640 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 HEMGNQ9BXL5 484 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 FSD1LQ9BXM9 530 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 LHPPQ9H008 270 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 NHEJ1Q9H9Q4 299 aaPredicted RBP5.86□□□□□ -1.47
VRK3-220ENST00000600259 NLE1Q9NVX2 485 aaPredicted RBP5.86□□□□□ -1.47
VRK3-220ENST00000600259 COPG2Q9UBF2 871 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 POLG2Q9UHN1 485 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 RSPH14Q9UHP6 348 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 INTUQ9ULD6 942 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 PLAGL1Q9UM63 463 aa5.86□□□□□ -1.47
VRK3-220ENST00000600259 KLF2Q9Y5W3 355 aaPredicted RBP5.86□□□□□ -1.47
VRK3-220ENST00000600259 PCNX1Q96RV3 2341 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 IGLV3-12A0A075B6K2 115 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 A0A1B0GX78 115 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 A0A1W2PQ72 361 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 MROH6A6NGR9 719 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 ISM1B1AKI9 464 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 APOC4-APOC2K7ER74 178 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 DSCR3O14972 297 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 PSTPIP1O43586 416 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 AKR1B10O60218 316 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 CTSVO60911 334 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 GPC4O75487 556 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 AP2A2O94973 939 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 APOC2P02655 101 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 TPH1P17752 444 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 MAGP20916 626 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 MST1P26927 711 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 PKLRP30613 574 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 FOXN2P32314 431 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 SOX11P35716 441 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 GRIA3P42263 894 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 TNNT3P45378 269 aaPredicted RBP5.85□□□□□ -1.47
VRK3-220ENST00000600259 OR1D4P47884 311 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 ARSFP54793 590 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 KCNK10P57789 538 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 ZNF630Q2M218 657 aaPredicted RBP5.85□□□□□ -1.47
VRK3-220ENST00000600259 FIGLAQ6QHK4 219 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 PACS1Q6VY07 963 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 LINC00696Q6ZRV3 163 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 SHISA6Q6ZSJ9 500 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 LAPTM4BQ86VI4 370 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 VRK3Q8IV63 474 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 BCORP1Q8N888 145 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 OR1N1Q8NGS0 311 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 ACTL9Q8TC94 416 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 STYXQ8WUJ0 223 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 NR4A3Q92570 626 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 N4BP2L2Q92802 583 aaPredicted RBP5.85□□□□□ -1.47
VRK3-220ENST00000600259 HAS2Q92819 552 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 MOCOSQ96EN8 888 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 THOC3Q96J01 351 aaKnown RBP5.85□□□□□ -1.47
VRK3-220ENST00000600259 LURAP1Q96LR2 239 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 NDC1Q9BTX1 674 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 TRIM8Q9BZR9 551 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 MRM3Q9HC36 420 aaKnown RBP5.85□□□□□ -1.47
VRK3-220ENST00000600259 SEMA3GQ9NS98 782 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 TXLNGQ9NUQ3 528 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 OLAHQ9NV23 265 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 PLA2G3Q9NZ20 509 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 CTSFQ9UBX1 484 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 CDC23Q9UJX2 597 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 ASF1AQ9Y294 204 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 EFR3BQ9Y2G0 817 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 AAR2Q9Y312 384 aaKnown RBP5.85□□□□□ -1.47
VRK3-220ENST00000600259 KLK4Q9Y5K2 254 aa5.85□□□□□ -1.47
VRK3-220ENST00000600259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.85□□□□□ -1.47
VRK3-220ENST00000600259 PCM1Q15154 2024 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SPG11Q96JI7 2443 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 NIPBLQ6KC79 2804 aaeCLIP5.84□□□□□ -1.47
VRK3-220ENST00000600259 LOC105369274A0A096LPK9 316 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 LOC102723532A0A0G2JNH3 316 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 OR51F1A6NGY5 319 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 TARM1B6A8C7 271 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 H7C0C1 242 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 SPOPO43791 374 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 OR1I1O60431 355 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 METTL18O95568 372 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 HPP00738 406 aa5.84□□□□□ -1.47
VRK3-220ENST00000600259 RBP3P10745 1247 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms