RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 AHSGP02765 367 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 TUBB4AP04350 444 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 MPC1LP0DKB6 136 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 CBSLP0DN79 551 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 PVRP15151 417 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 CBSP35520 551 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 CALCOCO2Q13137 446 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 GPR19Q15760 415 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 ZIC1Q15915 447 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 WHAMMP3Q1A5X7 153 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 HP1BP3Q5SSJ5 553 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-213ENST00000598355 TMTC4Q5T4D3 741 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 PWWP2BQ6NUJ5 590 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 ESX1Q8N693 406 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 FBXO36Q8NEA4 188 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 CFAP61Q8NHU2 1237 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 MAGEC3Q8TD91 643 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 CFAP36Q96G28 342 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 FOPNLQ96NB1 174 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 IL17FQ96PD4 163 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 MCMBPQ9BTE3 642 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 RAB17Q9H0T7 212 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 DPH5Q9H2P9 285 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 SOHLH2Q9NX45 425 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 KLK4Q9Y5K2 254 aa15.58■□□□□ 0.08
TRIM28-213ENST00000598355 LOC101059948A0A1B0GTJ6 334 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 A0A1W2PPV9 198 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 KRT87PA6NCN2 255 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 GFYI3L273 518 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 VPS26AO75436 327 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 KIAA0754O94854 1291 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 LIFP15018 202 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ARL4DP49703 201 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 CYP2A13Q16696 494 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 RBM20Q5T481 1227 aaKnown RBP15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ARHGAP40Q5TG30 622 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ZDHHC24Q6UX98 284 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 CYHR1Q6ZMK1 362 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ZNF517Q6ZMY9 492 aaPredicted RBP15.57■□□□□ 0.08
TRIM28-213ENST00000598355 CDHR3Q6ZTQ4 885 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 TRIM73Q86UV7 250 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ANKMY2Q8IV38 441 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 IL22RA1Q8N6P7 574 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ASB11Q8WXH4 323 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 TTC9Q92623 222 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 INPP5DQ92835 1189 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 SLC22A18Q96BI1 424 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 FAM60AQ9NP50 221 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 ENAMQ9NRM1 1142 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 UTP11Q9Y3A2 253 aaKnown RBP15.57■□□□□ 0.08
TRIM28-213ENST00000598355 PCDHB3Q9Y5E6 796 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 COL6A6A6NMZ7 2263 aa15.57■□□□□ 0.08
TRIM28-213ENST00000598355 KIF2AO00139 706 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-213ENST00000598355 C1QAP02745 245 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 CARSP49589 748 aaKnown RBP15.56■□□□□ 0.08
TRIM28-213ENST00000598355 CDKN2DP55273 166 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 RHDQ02161 417 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 CAV1Q03135 178 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 MGAT5Q09328 741 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 CUL1Q13616 776 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 ARHGAP19Q14CB8 494 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 LRRC8EQ6NSJ5 796 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 TTC23LQ6PF05 361 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 PCSK4Q6UW60 755 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 CPNE9Q8IYJ1 553 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 ZBED8Q8IZ13 594 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 OR1L3Q8NH93 324 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 FBXO25Q8TCJ0 367 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 SKA2Q8WVK7 121 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-213ENST00000598355 TCTN2Q96GX1 697 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 SLC45A3Q96JT2 553 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 LRFN5Q96NI6 719 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 UBL7Q96S82 380 aaPredicted RBP15.56■□□□□ 0.08
TRIM28-213ENST00000598355 NDNQ99608 321 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 SLC12A9Q9BXP2 914 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 FAM114A2Q9NRY5 505 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 CIDEBQ9UHD4 219 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 LNPEPQ9UIQ6 1025 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 RALYQ9UKM9 306 aaKnown RBP15.56■□□□□ 0.08
TRIM28-213ENST00000598355 PSAT1Q9Y617 370 aa15.56■□□□□ 0.08
TRIM28-213ENST00000598355 ISM1B1AKI9 464 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 HCRTR1O43613 425 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 CPNE3O75131 537 aaKnown RBP15.55■□□□□ 0.08
TRIM28-213ENST00000598355 URI1O94763 535 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-213ENST00000598355 TSPAN12O95859 305 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 MT-ND3P03897 115 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 CATP04040 527 aaKnown RBP15.55■□□□□ 0.08
TRIM28-213ENST00000598355 FDXRP22570 491 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 SKIV2L2P42285 1042 aaKnown RBP15.55■□□□□ 0.08
TRIM28-213ENST00000598355 CRTC2Q53ET0 693 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-213ENST00000598355 UGT3A1Q6NUS8 523 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 C6orf15Q6UXA7 325 aaPredicted RBP15.55■□□□□ 0.08
TRIM28-213ENST00000598355 CYS1Q717R9 158 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 SLC26A11Q86WA9 606 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 LMNTD1Q8N9Z9 388 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 GALNT6Q8NCL4 622 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 OR9A1PQ8NGU1 263 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 ELMO2Q96JJ3 720 aa15.55■□□□□ 0.08
TRIM28-213ENST00000598355 BBC3Q96PG8 261 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms