RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 MGAT5Q09328 741 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 CUL1Q13616 776 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 MAP7Q14244 749 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 TRADDQ15628 312 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 ARHGAP40Q5TG30 622 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 PWWP2BQ6NUJ5 590 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 GPR155Q7Z3F1 870 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 TRIM73Q86UV7 250 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 SPNS2Q8IVW8 549 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 IL22RA1Q8N6P7 574 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 LMNTD1Q8N9Z9 388 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 OR8K5Q8NH50 307 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 DENND1AQ8TEH3 1009 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 SLC22A18Q96BI1 424 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 NDNQ99608 321 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 RAB11FIP5Q9BXF6 653 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 KLHL25Q9H0H3 589 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 SYTL2Q9HCH5 934 aa16.16■□□□□ 0.18
SSBP4-204ENST00000597724 A0A0J9YY10 115 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 KRT87PA6NCN2 255 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 EIF3FO00303 357 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 MAP3K7O43318 606 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 PRICKLE3O43900 615 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 KIAA0754O94854 1291 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 MPC1LP0DKB6 136 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 ENO3P13929 434 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 RBM20Q5T481 1227 aaKnown RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 UGT3A1Q6NUS8 523 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 C8orf74Q6P047 294 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 CYHR1Q6ZMK1 362 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 CDHR3Q6ZTQ4 885 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 C2orf73Q8N5S3 287 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 ESX1Q8N693 406 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 C19orf47Q8N9M1 422 aaKnown RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 HMGCLL1Q8TB92 370 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 FBXO25Q8TCJ0 367 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 RNF31Q96EP0 1072 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 TCTN2Q96GX1 697 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 LRRC1Q9BTT6 524 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 CHRNA10Q9GZZ6 450 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 SAYSD1Q9NPB0 183 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 TAS2R13Q9NYV9 303 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 ZFATQ9P243 1243 aa16.15■□□□□ 0.18
SSBP4-204ENST00000597724 RALYQ9UKM9 306 aaKnown RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 CORO1CQ9ULV4 474 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 SNRNP200O75643 2136 aaKnown RBP16.15■□□□□ 0.18
SSBP4-204ENST00000597724 LOC101059948A0A1B0GTJ6 334 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 ARHGEF33A8MVX0 844 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 GFYI3L273 518 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 WT1P19544 449 aaPredicted RBP16.14■□□□□ 0.17
SSBP4-204ENST00000597724 CDKN2DP55273 166 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 SLC7A5Q01650 507 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 ABHD18Q0P651 414 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 ZIC1Q15915 447 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.14■□□□□ 0.17
SSBP4-204ENST00000597724 ZDHHC24Q6UX98 284 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 C6orf15Q6UXA7 325 aaPredicted RBP16.14■□□□□ 0.17
SSBP4-204ENST00000597724 PALM2Q8IXS6 379 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 CPNE9Q8IYJ1 553 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 MMGT1Q8N4V1 131 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 RAB42Q8N4Z0 105 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 GALNT6Q8NCL4 622 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 OR9A1PQ8NGU1 263 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 ASB11Q8WXH4 323 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 PHACTR1Q9C0D0 580 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 FAM60AQ9NP50 221 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 FAM114A2Q9NRY5 505 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 SPATA7Q9P0W8 599 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 LNPEPQ9UIQ6 1025 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 TRMT6Q9UJA5 497 aaKnown RBP16.14■□□□□ 0.17
SSBP4-204ENST00000597724 PSAT1Q9Y617 370 aa16.14■□□□□ 0.17
SSBP4-204ENST00000597724 MYO1CO00159 1063 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 CATP04040 527 aaKnown RBP16.13■□□□□ 0.17
SSBP4-204ENST00000597724 ERGP11308 486 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 LIFP15018 202 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 MCM3P25205 808 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 STAT5AP42229 794 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 SF1Q15637 639 aaKnown RBP16.13■□□□□ 0.17
SSBP4-204ENST00000597724 CYP2A13Q16696 494 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 CYS1Q717R9 158 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 PIWIL4Q7Z3Z4 852 aaKnown RBP16.13■□□□□ 0.17
SSBP4-204ENST00000597724 TAX1BP1Q86VP1 789 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 SLC26A11Q86WA9 606 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 FAM20CQ8IXL6 584 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 FBXO15Q8NCQ5 510 aaPredicted RBP16.13■□□□□ 0.17
SSBP4-204ENST00000597724 MNS1Q8NEH6 495 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 OR1L3Q8NH93 324 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 EEF1AKMT1Q8WVE0 214 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 SEC14L1Q92503 715 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 FANCEQ9HB96 536 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 VWA7Q9Y334 891 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 SPTBP11277 2137 aa16.13■□□□□ 0.17
SSBP4-204ENST00000597724 TMEM150CB9EJG8 249 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 SCRG1O75711 98 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 FKBP9O95302 570 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 MT-ND3P03897 115 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 NTRK1P04629 796 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 MAGP20916 626 aa16.12■□□□□ 0.17
SSBP4-204ENST00000597724 OAS2P29728 719 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms