RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 RPA4Q13156 261 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 TRIM14Q14142 442 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 SEMA3AQ14563 771 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 ZNF169Q14929 603 aaPredicted RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 SYTL3Q4VX76 610 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 KCTD11Q693B1 232 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 SP5Q6BEB4 398 aaPredicted RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 TLDC1Q6P9B6 456 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 LDB1Q86U70 411 aaPredicted RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 MCATQ8IVS2 390 aaKnown RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 CDKL3Q8IVW4 592 aaPredicted RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 SPNS2Q8IVW8 549 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 TBC1D21Q8IYX1 336 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 OR5K2Q8NHB8 316 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 PPP4R1Q8TF05 950 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 FAR1Q8WVX9 515 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 TM9SF4Q92544 642 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 ALG3Q92685 438 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 MENTQ9BUN1 341 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 VPS37BQ9H9H4 285 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 AGPAT4Q9NRZ5 378 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 PLA2G3Q9NZ20 509 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 SLC2A6Q9UGQ3 507 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 TSR3Q9UJK0 312 aaKnown RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 RUVBL2Q9Y230 463 aaKnown RBP10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 POLEQ07864 2286 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 CRYBG3Q68DQ2 2970 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 CNTRLQ7Z7A1 2325 aa10.75□□□□□ -0.69
PRKCSH-220ENST00000593104 A0A1B0GX78 115 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 LIN7AO14910 233 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 WISP2O76076 250 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 IPO13O94829 963 aaKnown RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 MSNP26038 577 aaKnown RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 ST13P50502 369 aaKnown RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 SOX8P57073 446 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 CACNG1Q06432 222 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 GRB7Q14451 532 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 RBBP7Q16576 425 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 KCTD19Q17RG1 926 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 SLC5A12Q1EHB4 618 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 GPR33Q49SQ1 333 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 CCSMST1Q4G0I0 132 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 AGAP7PQ5VUJ5 663 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 ZNF449Q6P9G9 518 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 OVCH1Q7RTY7 1134 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 SHISA5Q8N114 240 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 KRT222Q8N1A0 295 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 FAM71DQ8N9W8 422 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 RNF214Q8ND24 703 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 OR11G2Q8NGC1 345 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 HEXDCQ8WVB3 486 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 MAGEB10Q96LZ2 347 aaPredicted RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 AGAP4Q96P64 663 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 TAAR6Q96RI8 345 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 C17orf62Q9BQA9 187 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 OSBPL8Q9BZF1 889 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 SYNPO2LQ9H987 977 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 CUTCQ9NTM9 273 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 OR6C2Q9NZP2 312 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 SH3BGRL2Q9UJC5 107 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 INTUQ9ULD6 942 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 R3HDM2Q9Y2K5 976 aaKnown RBP10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 DUSP10Q9Y6W6 482 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 CELSR2Q9HCU4 2923 aa10.74□□□□□ -0.69
PRKCSH-220ENST00000593104 H7C0S8 307 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 CTSVO60911 334 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 AP2A2O94973 939 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 AP2A1O95782 977 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 TPM3P06753 285 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 CCR7P32248 378 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 GRIA1P42261 906 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 TSFMP43897 325 aaKnown RBP10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 BDKRB1P46663 353 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 HSPA14Q0VDF9 509 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 TUBB8Q3ZCM7 444 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 FRMPD2BQ6IN97 320 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 C11orf63Q6NUN7 778 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 IGFL2Q6UWQ7 119 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 PRUNE1Q86TP1 453 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 MCEMP1Q8IX19 187 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 OR52K1Q8NGK4 314 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 OR1N1Q8NGS0 311 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 ZNF778Q96MU6 729 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 ARNT2Q9HBZ2 717 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 ZNF160Q9HCG1 818 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 PCDHA13Q9Y5I0 950 aa10.73□□□□□ -0.69
PRKCSH-220ENST00000593104 LOC105369274A0A096LPK9 316 aa10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 LOC102723532A0A0G2JNH3 316 aa10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 A0A0J9YVX5 310 aa10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 TCRBV7S2A1N4TA0A589 114 aa10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 AKR1B15C9JRZ8 316 aaPredicted RBP10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 DSCR3O14972 297 aa10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 HNRNPRO43390 633 aaKnown RBP10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 JRKO75564 520 aa10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 STK10O94804 968 aaKnown RBP10.72□□□□□ -0.69
PRKCSH-220ENST00000593104 GOT2P00505 430 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms