RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, human

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXXC1-208	ENST00000587170	HAUS1	Q96CS2	278 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	DNAJC1	Q96KC8	554 aa	Known RBP	13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	APOL2	Q9BQE5	337 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	MENT	Q9BUN1	341 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	SEMA3G	Q9NS98	782 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	OLAH	Q9NV23	265 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	CDC23	Q9UJX2	597 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	INTU	Q9ULD6	942 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	ASF1A	Q9Y294	204 aa		13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CXXC1-208	ENST00000587170	MAP1A	P78559	2803 aa	Predicted RBP	13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170		A0A1W2PQ72	361 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	SLC5A10	A0PJK1	596 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	CCDC78	A2IDD5	438 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	VSTM2B	A6NLU5	285 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	QSOX1	O00391	747 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	CCL22	O00626	93 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	AKR1B10	O60218	316 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	JRK	O75564	520 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	PIM1	P11309	404 aa	Predicted RBP	13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	MAG	P20916	626 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	TPM4	P67936	248 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	DBN1	Q16643	649 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	TTLL10	Q6ZVT0	673 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	GDF7	Q7Z4P5	450 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	PIANP	Q8IYJ0	282 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	OR8K1	Q8NGG5	319 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	CNDP1	Q96KN2	507 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	PPP1R2P1	Q96PQ5	205 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	LMF1	Q96S06	567 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	LUC7L	Q9NQ29	371 aa	Known RBP	13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	NLE1	Q9NVX2	485 aa	Predicted RBP	13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	CTSF	Q9UBX1	484 aa		13.55	□□□□□ -0.24
CXXC1-208	ENST00000587170	FITM1	A5D6W6	292 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	KRT38	O76015	456 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	KLHL18	O94889	574 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	PRSS56	P0CW18	603 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	TNNT1	P13805	278 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	PKLR	P30613	574 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	SOX11	P35716	441 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	NSG1	P42857	185 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	MARCKSL1	P49006	195 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	CACNG1	Q06432	222 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	TRIM14	Q14142	442 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	ITIH4	Q14624	930 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	ANKRD20A2	Q5SQ80	823 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	ANKRD20A1	Q5TYW2	823 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	ANKRD20A3	Q5VUR7	823 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	MICALCL	Q6ZW33	695 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	RCOR2	Q8IZ40	523 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	LINC01555	Q8NAE3	123 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	NR4A3	Q92570	626 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	VPS50	Q96JG6	964 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	LURAP1	Q96LR2	239 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	TAAR6	Q96RI8	345 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	TBL1Y	Q9BQ87	522 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	ANP32E	Q9BTT0	268 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	SPTLC3	Q9NUV7	552 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	IFNK	Q9P0W0	207 aa		13.54	□□□□□ -0.24
CXXC1-208	ENST00000587170	KDM1A	O60341	852 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	HP	P00738	406 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	FTH1	P02794	183 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	RAB28	P51157	221 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	PLOD1	Q02809	727 aa	Predicted RBP	13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	RBBP7	Q16576	425 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	TMTC1	Q8IUR5	882 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	MCAT	Q8IVS2	390 aa	Known RBP	13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	PARP9	Q8IXQ6	854 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	ELMO1	Q92556	727 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	THOC3	Q96J01	351 aa	Known RBP	13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	CHP1	Q99653	195 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	C10orf88	Q9H8K7	445 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	CUTC	Q9NTM9	273 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	IRAK4	Q9NWZ3	460 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	IL1RAPL1	Q9NZN1	696 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	ALG6	Q9Y672	507 aa		13.53	□□□□□ -0.24
CXXC1-208	ENST00000587170	HCFC1	P51610	2035 aa		13.52	□□□□□ -0.24
CXXC1-208	ENST00000587170	ISM1	B1AKI9	464 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170		H7C0C1	242 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	ALAS2	P22557	587 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	FDXR	P22570	491 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	ATP5O	P48047	213 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	TNFSF10	P50591	281 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	KCNK10	P57789	538 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	GRB7	Q14451	532 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	PRPSAP1	Q14558	356 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	GRM7	Q14831	915 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	ZNF630	Q2M218	657 aa	Predicted RBP	13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	TCTE1	Q5JU00	501 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	KCTD11	Q693B1	232 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	CAVIN1	Q6NZI2	390 aa	Known RBP	13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	LINC00696	Q6ZRV3	163 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	NLRP9	Q7RTR0	991 aa		13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.52	□□□□□ -0.25
CXXC1-208	ENST00000587170	SLC22A15	Q8IZD6	547 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms