RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 ZNF839A8K0R7 811 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 AGAP14A8MT82 685 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SUPT3HB4E1H0 165 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 H3BMM5 538 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PSMD11O00231 422 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 MMP20O60882 483 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SUPT3HO75486 399 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TRMUO75648 421 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TIPRLO75663 272 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SIX3O95343 332 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PKMP14618 531 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 CCT8P50990 548 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 DCDC1P59894 354 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ESRRGP62508 458 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ERVK-8P63133 956 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 GRB7Q14451 532 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TMEM52BQ4KMG9 183 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 CTSL3PQ5NE16 218 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 LYPLAL1Q5VWZ2 237 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 AMIGO2Q86SJ2 522 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 GALNT13Q8IUC8 556 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ADHFE1Q8IWW8 467 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 NXPE1Q8N323 547 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 FUBP1Q96AE4 644 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 COQ10AQ96MF6 247 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 RIOK2Q9BVS4 552 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 BOCQ9BWV1 1114 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ABCG8Q9H221 673 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 RAD18Q9NS91 495 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 CMTM6Q9NX76 183 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SERGEFQ9UGK8 458 aa14.64□□□□□ -0.07
CDK5RAP3-236ENST00000584991 FAM234BA2RU67 622 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PRMT5O14744 637 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 WNT9AO14904 365 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SNX2O60749 519 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SLC22A3O75751 556 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 RASAL1O95294 804 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ZNF7P17097 686 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TSPAN8P19075 237 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 HTR1EP28566 365 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ATP6AP1Q15904 470 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SETMARQ53H47 684 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 HENMT1Q5T8I9 393 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 AGBL4Q5VU57 503 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 MYO1HQ8N1T3 1032 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 DPP10Q8N608 796 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 CXorf40AQ8TE69 158 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TMEM125Q96AQ2 219 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ZNF382Q96SR6 550 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 P2RY12Q9H244 342 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ALG2Q9H553 416 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 FBRSQ9HAH7 460 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TMPRSS11EQ9UL52 423 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 MED16Q9Y2X0 877 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TNPO3Q9Y5L0 923 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PIKFYVEQ9Y2I7 2098 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 MAN2B1O00754 1011 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 LZTS3O60299 673 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 NIPSNAP2O75323 286 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 DNTTP04053 509 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ENO2P09104 434 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 LINC00032P0C843 101 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 C6P13671 934 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 FOXA1P55317 472 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 IL2P60568 153 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ZP2Q05996 745 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 MERTKQ12866 999 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SMU1Q2TAY7 513 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ZNF284Q2VY69 593 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SLC36A3Q495N2 470 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 LRRC23Q53EV4 343 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 EOGTQ5NDL2 527 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 NRSN1Q8IZ57 195 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ADGRG5Q8IZF4 528 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 RBFAQ8N0V3 343 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TRAM1L1Q8N609 369 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 GANCQ8TET4 914 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 KCNJ9Q92806 393 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 EXT2Q93063 718 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 POP5Q969H6 163 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ULK4Q96C45 1275 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 AP2M1Q96CW1 435 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 DTD2Q96FN9 168 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 CLPBQ9H078 707 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 CAAP1Q9H8G2 361 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 NFKBIL1Q9UBC1 381 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 GALPQ9UBC7 116 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PCTPQ9UKL6 214 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 PRSS21Q9Y6M0 314 aa14.63□□□□□ -0.07
CDK5RAP3-236ENST00000584991 H3BSA7 217 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SOCS2O14508 198 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ARPC2O15144 300 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 RECQL5O94762 991 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ESR1P03372 595 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TAS2R38P59533 333 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 NFYCQ13952 458 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 TMEM92Q6UXU6 159 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 ZNF852Q6ZMS4 543 aa14.62□□□□□ -0.07
CDK5RAP3-236ENST00000584991 SPPL2CQ8IUH8 684 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms