RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 APOL4Q9BPW4 351 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 SMG9Q9H0W8 520 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 INTS7Q9NVH2 962 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 C1orf109Q9NX04 203 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ZNF639Q9UID6 485 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 PDE10AQ9Y233 779 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 TPRKBQ9Y3C4 175 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 KCNE2Q9Y6J6 123 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 WDR81Q562E7 1941 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 CAPN3P20807 821 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 FDXRP22570 491 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 NSG1P42857 185 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 DNASE1L3Q13609 305 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 C18orf21Q32NC0 220 aaPredicted RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 SPANXN4Q5MJ08 99 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 GOLGA7Q7Z5G4 137 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 ARMC8Q8IUR7 673 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 MMAAQ8IVH4 418 aaKnown RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 RAB42Q8N4Z0 105 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 SETD9Q8NE22 299 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 C2orf15Q8WU43 125 aaKnown RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 ASZ1Q8WWH4 475 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 BIRC7Q96CA5 298 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 AURKBQ96GD4 344 aaPredicted RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 FAM83DQ9H4H8 585 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 CMTM6Q9NX76 183 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 MAP10Q9P2G4 905 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 GMPR2Q9P2T1 348 aaKnown RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 ZNF840PA6NDX5 716 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 RSL1D1O76021 490 aaKnown RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 STC2O76061 302 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 COL6A1P12109 1028 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 HOXD8P13378 290 aaPredicted RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 SLC6A2P23975 617 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 GRK3P35626 688 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 RGRP47804 291 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 KCNC1P48547 511 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 RPS14P62263 151 aaKnown RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 DAG1Q14118 895 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 RAET1GQ6H3X3 334 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 CCDC149Q6ZUS6 474 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 FUNDC1Q8IVP5 155 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 CNTN4Q8IWV2 1026 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 KCNJ9Q92806 393 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 DNAJC11Q9NVH1 559 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 hCG_2039718K7EN88 272 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 ARSFP54793 590 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 CYP4F3Q08477 520 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 FNDC3BQ53EP0 1204 aaKnown RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 PLPP4Q5VZY2 271 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 BEND5Q7L4P6 421 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 TMCO2Q7Z6W1 182 aaPredicted RBP10.22□□□□□ -0.77
RNF40-204ENST00000563683 KIAA2013Q8IYS2 634 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 SCML4Q8N228 414 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 RHEBL1Q8TAI7 183 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 ARRDC2Q8TBH0 407 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 TSPEARQ8WU66 669 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 SP140LQ9H930 580 aa10.22□□□□□ -0.77
RNF40-204ENST00000563683 ISPDA4D126 451 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 M0QX08 132 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 CXCR6O00574 342 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 B4GAT1O43505 415 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 PRKD3O94806 890 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 TRBC1P01850 177 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 ADH1AP07327 375 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 ELFN1P0C7U0 828 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 TLE2Q04725 743 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 DMPKQ09013 629 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 SELENBP1Q13228 472 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 PAGE2BQ5JRK9 111 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 BRWD3Q6RI45 1802 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 TMPRSS11BQ86T26 416 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 RBM23Q86U06 439 aaKnown RBP10.21□□□□□ -0.77
RNF40-204ENST00000563683 SLC22A16Q86VW1 577 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 PTRH1Q86Y79 214 aaKnown RBP10.21□□□□□ -0.77
RNF40-204ENST00000563683 PHACTR4Q8IZ21 702 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 CAPSLQ8WWF8 208 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 CLP1Q92989 425 aaKnown RBP10.21□□□□□ -0.77
RNF40-204ENST00000563683 WRAP53Q9BUR4 548 aaKnown RBP10.21□□□□□ -0.77
RNF40-204ENST00000563683 SGK2Q9HBY8 427 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 FBXO8Q9NRD0 319 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 POU2F3Q9UKI9 436 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 TMCC3Q9ULS5 477 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 SLC22A14Q9Y267 594 aa10.21□□□□□ -0.77
RNF40-204ENST00000563683 LOC100506127A0A0U1RQW1 187 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 MUSKO15146 869 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 NUAK1O60285 661 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 NDUFS2O75306 463 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 NADKO95544 446 aaPredicted RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 HPRP00739 348 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 SERPINA1P01009 418 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ITIH1P19827 911 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 PRKACGP22612 351 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 ADRA1AP35348 466 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 EEFSECP57772 596 aaKnown RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 NFKB2Q00653 900 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 CCDC85BQ15834 202 aaPredicted RBP10.21□□□□□ -0.78
RNF40-204ENST00000563683 MBOAT1Q6ZNC8 495 aa10.21□□□□□ -0.78
RNF40-204ENST00000563683 BTLAQ7Z6A9 289 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms