RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 IPPQ9Y573 584 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 EVPLLA8MZ36 301 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 SEMA3DO95025 777 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 HOXB8P17481 243 aaPredicted RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 HOXC13P31276 330 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 AFF1P51825 1210 aaKnown RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 DDR2Q16832 855 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 PAN2Q504Q3 1202 aaKnown RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 ARTNQ5T4W7 220 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 RAP1GAP2Q684P5 730 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 HORMAD1Q86X24 394 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 CITED4Q96RK1 184 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 SDHCQ99643 169 aaPredicted RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 FARSBQ9NSD9 589 aaKnown RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 RAPGEFL1Q9UHV5 662 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 VPS4AQ9UN37 437 aa16.12■□□□□ 0.17
TPM1-228ENST00000560975 SAMHD1Q9Y3Z3 626 aaKnown RBP16.12■□□□□ 0.17
TPM1-228ENST00000560975 MN1Q10571 1320 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 PTGESO14684 152 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 C1QCP02747 245 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 RPLP0P05388 317 aaKnown RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 DARSP14868 501 aaKnown RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 SLC19A1P41440 591 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 NRIP1P48552 1158 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 AFMIDQ63HM1 303 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 VTCN1Q7Z7D3 282 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 TSPYL5Q86VY4 417 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 ENTHD1Q8IYW4 607 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 GPR150Q8NGU9 434 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 SIRT5Q9NXA8 310 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 HSPE1-MOB4S4R3N1 261 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 H3BQ06 376 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 IFRD1O00458 451 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 CRYZL1O95825 349 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 EFNA1P20827 205 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 ALFQ53S48 1182 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 ZNF517Q6ZMY9 492 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 SNX20Q7Z614 316 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 KBTBD8Q8NFY9 601 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 IPCEF1Q8WWN9 437 aaPredicted RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 SH3GL1Q99961 368 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 ROGDIQ9GZN7 287 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 TRMT6Q9UJA5 497 aaKnown RBP16.11■□□□□ 0.17
TPM1-228ENST00000560975 TBC1D24Q9ULP9 559 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 PEX16Q9Y5Y5 336 aa16.11■□□□□ 0.17
TPM1-228ENST00000560975 DNAJC25-GNG10A0A024R161 153 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 IQCF5A8MTL0 148 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 ICMTO60725 284 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 NAT1P18440 290 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 AZGP1P25311 298 aaKnown RBP16.1■□□□□ 0.17
TPM1-228ENST00000560975 Q5BKY6 102 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 UBXN11Q5T124 520 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 FAM171A1Q5VUB5 890 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 SIGIRRQ6IA17 410 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 GOLGA7Q7Z5G4 137 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 KCNC2Q96PR1 638 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 PHOX2BQ99453 314 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 INPP5KQ9BT40 448 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 C1QTNF3Q9BXJ4 246 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 PRRG3Q9BZD7 231 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 LOC285095A0A1B0GVY8 99 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 ZSCAN5BA6NJL1 495 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 OR7A17O14581 309 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 SEC22BO75396 215 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 IGLV3-25P01717 112 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 OGNP20774 298 aaKnown RBP16.1■□□□□ 0.17
TPM1-228ENST00000560975 CA5AP35218 305 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 IRF3Q14653 427 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 PROX2Q3B8N5 592 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 TRAF7Q6Q0C0 670 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 SLC46A3Q7Z3Q1 461 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 CYP4Z2PQ8N1L4 340 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 NKAPQ8N5F7 415 aaKnown RBP16.1■□□□□ 0.17
TPM1-228ENST00000560975 OR4K2Q8NGD2 314 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 PPTC7Q8NI37 304 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 NXF2Q9GZY0 626 aaKnown RBP16.1■□□□□ 0.17
TPM1-228ENST00000560975 RPRD1BQ9NQG5 326 aaKnown RBP16.1■□□□□ 0.17
TPM1-228ENST00000560975 MOSPD1Q9UJG1 213 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 ZNF451Q9Y4E5 1061 aa16.1■□□□□ 0.17
TPM1-228ENST00000560975 ERVH48-1M5A8F1 160 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 KLK8O60259 260 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 GUCA1CO95843 209 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TSPAN12O95859 305 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 ABCB1P08183 1280 aaPredicted RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 ACVR1Q04771 509 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 SLAMF1Q13291 335 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 MFSD10Q14728 455 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 TAB1Q15750 504 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 PIK3R6Q5UE93 754 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 ZNF438Q7Z4V0 828 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 CIR1Q86X95 450 aaPredicted RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 ZNF675Q8TD23 568 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 DNAJB3Q8WWF6 145 aa16.09■□□□□ 0.17
TPM1-228ENST00000560975 MTFMTQ96DP5 389 aaKnown RBP16.09■□□□□ 0.17
TPM1-228ENST00000560975 FYTTD1Q96QD9 318 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms