RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 LIPMQ5VYY2 423 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 DEGS2Q6QHC5 323 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TMEM207Q6UWW9 146 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 Q6ZNX1 250 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 SPATA31D4Q6ZUB0 917 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CYP2U1Q7Z449 544 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 LDB1Q86U70 411 aaPredicted RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CILP2Q8IUL8 1156 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 PHTF2Q8N3S3 785 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ADCY4Q8NFM4 1077 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 LPGAT1Q92604 370 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 OPALINQ96PE5 141 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TRIB3Q96RU7 358 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 C12orf57Q99622 126 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 SEMA3CQ99985 751 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TLK1Q9UKI8 766 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 RPL26L1Q9UNX3 145 aaKnown RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ERGIC3Q9Y282 383 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ANKRD6Q9Y2G4 727 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 KIAA0100Q14667 2235 aaKnown RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 DBX1A6NMT0 343 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 MEI4A8MW99 385 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 B2RBV5 119 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 E9PBE3 544 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 PAPSS2O95340 614 aaPredicted RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 FHP07954 510 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CD63P08962 238 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CHRM3P20309 590 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 KCNA5P22460 613 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 GSTM5P46439 218 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 GRIA4P48058 902 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CCNG1P51959 295 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ABATP80404 500 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CHRNEQ04844 493 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TRIM16LQ309B1 348 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 WASHC2DQ5SRD0 308 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 FAM219BQ5XKK7 198 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 KIAA0408Q6ZU52 694 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ANKRD33Q7Z3H0 272 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TMCO2Q7Z6W1 182 aaPredicted RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TMEM150AQ86TG1 271 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 LGI2Q8N0V4 545 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 BBS5Q8N3I7 341 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TXNDC5Q8NBS9 432 aaKnown RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 RDH11Q8TC12 318 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 RAD51AP1Q96B01 352 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ANAPC16Q96DE5 110 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 CLPTM1LQ96KA5 538 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 UBXN10Q96LJ8 280 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 RILPQ96NA2 401 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 DEFB118Q96PH6 123 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 OR52B2Q96RD2 323 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 PKP4Q99569 1192 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 MGME1Q9BQP7 344 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 TUBB6Q9BUF5 446 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 SLC6A17Q9H1V8 727 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 C1orf21Q9H246 121 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 EVA1AQ9H8M9 152 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ERVMER34-1Q9H9K5 563 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 RC3H2Q9HBD1 1191 aaKnown RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 MOV10Q9HCE1 1003 aaKnown RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ZDHHC2Q9UIJ5 367 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 PADI4Q9UM07 663 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 SORCS3Q9UPU3 1222 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ACOT9Q9Y305 439 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ARL5AQ9Y689 179 aa4.99□□□□□ -1.61
TMEM260-210ENST00000556422 ZFP37Q9Y6Q3 630 aaPredicted RBP4.99□□□□□ -1.61
TMEM260-210ENST00000556422 A0A1W2PRG6 482 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 NEMP2A6NFY4 417 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 H7C4K7 107 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 hCG_2039718K7EN88 272 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 GRID2O43424 1007 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 FKTNO75072 461 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 STC2O76061 302 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 OR7A10O76100 309 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ABLIM3O94929 683 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 SLC34A2O95436 690 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CD160O95971 181 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 NCF2P19878 526 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CR2P20023 1033 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PGDP52209 483 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 NAGLUP54802 743 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 CDKN2DP55273 166 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZXDBP98169 803 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 IKBKEQ14164 716 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ARL13AQ5H913 290 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 DEFB128Q7Z7B8 93 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KIAA0907Q7Z7F0 614 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZSWIM9Q86XI8 627 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 KIF18BQ86Y91 864 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 TMPRSS6Q8IU80 811 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 AFAP1L2Q8N4X5 818 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 POU5F2Q8N7G0 328 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 OR7D4Q8NG98 312 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 PPP4R1Q8TF05 950 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 C11orf24Q96F05 449 aaPredicted RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 IGSF21Q96ID5 467 aa4.98□□□□□ -1.61
TMEM260-210ENST00000556422 ZFRQ96KR1 1074 aaKnown RBP4.98□□□□□ -1.61
TMEM260-210ENST00000556422 MYRFLQ96LU7 910 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms