RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 LPCAT2Q7L5N7 544 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TECPR1Q7Z6L1 1165 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TMEM135Q86UB9 458 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TSPAN33Q86UF1 283 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 LMNTD2Q8IXW0 634 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3Q8IZP1 549 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 CNPY4Q8N129 248 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 MPP5Q8N3R9 675 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 GABPB2Q8TAK5 448 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 STYXQ8WUJ0 223 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 IFT81Q8WYA0 676 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 EID2BQ96D98 161 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ERLEC1Q96DZ1 483 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 STAMBPL1Q96FJ0 436 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 DTD2Q96FN9 168 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TTC25Q96NG3 672 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ZSCAN5AQ9BUG6 496 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 WRAP53Q9BUR4 548 aaKnown RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SLC17A9Q9BYT1 436 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TPSD1Q9BZJ3 242 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 FAM83DQ9H4H8 585 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TREX1Q9NSU2 369 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 NLE1Q9NVX2 485 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SMOXQ9NWM0 555 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 PKD2L2Q9NZM6 624 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 IL17CQ9P0M4 197 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ITM2BQ9Y287 266 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 MAD1L1Q9Y6D9 718 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TEX264Q9Y6I9 313 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ZDBF2Q9HCK1 2354 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 KMT2EQ8IZD2 1858 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 A0A1W2PPC4 97 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PRAMEF26H0Y7S4 382 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CTIFO43310 598 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 BRINP1O60477 761 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 FAM20BO75063 409 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 RECQL5O94762 991 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 RHOBTB1O94844 696 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CLDN7O95471 211 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PRKCGP05129 697 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 HOXC4P09017 264 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PIRTP0C851 137 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ENPP1P22413 925 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 HNRNPA2B1P22626 353 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CD27P26842 260 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 AKT2P31751 481 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 SPAM1P38567 509 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ELK3P41970 407 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 MAGEA4P43358 317 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 DMWDQ09019 674 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 OVGP1Q12889 678 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PDIA2Q13087 525 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 MTM1Q13496 603 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ITGA9Q13797 1035 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 STAT4Q14765 748 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 TRADDQ15628 312 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ELF2Q15723 593 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.67□□□□□ -1.53e-7■■■□□ 18.5
SCAF11-213ENST00000550629 ERCC6LQ2NKX8 1250 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ANKRD20A4Q4UJ75 823 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 LRRC73Q5JTD7 316 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 AARS2Q5JTZ9 985 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 SPANXN3Q5MJ09 141 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 WDR45BQ5MNZ6 344 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 HENMT1Q5T8I9 393 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 LYPLAL1Q5VWZ2 237 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 STEAP4Q687X5 459 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 SEL1L3Q68CR1 1132 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 KIAA0930Q6ICG6 404 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CASC4Q6P4E1 433 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 EMBQ6PCB8 327 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 TSSK4Q6SA08 328 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CCNI2Q6ZMN8 369 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 Q6ZVL8 140 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 TRMT10CQ7L0Y3 403 aaKnown RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 HSD11B1LQ7Z5J1 315 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 RABEPKQ7Z6M1 372 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 IQCHQ86VS3 1027 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ZBED8Q8IZ13 594 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 TRAM1L1Q8N609 369 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 OR13J1Q8NGT2 312 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF483Q8TF39 744 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 PYROXD1Q8WU10 500 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 SNX33Q8WV41 574 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 HEXDCQ8WVB3 486 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 RLN3Q8WXF3 142 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 DNASE2BQ8WZ79 361 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 CENPTQ96BT3 561 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 ULK4Q96C45 1275 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 BIRC7Q96CA5 298 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 NUS1Q96E22 293 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 VPS35Q96QK1 796 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 KLF6Q99612 283 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 LRFN3Q9BTN0 628 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 GPR174Q9BXC1 333 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
SCAF11-213ENST00000550629 C6orf106Q9H6K1 298 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-213ENST00000550629 IL26Q9NPH9 171 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms