RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 GAB4Q2WGN9 574 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 RUNDC3AQ59EK9 446 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 SPANXN4Q5MJ08 99 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 TMTC4Q5T4D3 741 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 LIPIQ6XZB0 460 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 PARS2Q7L3T8 475 aaKnown RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 GRASPQ7Z6J2 395 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 NLRP8Q86W28 1048 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 CALHM3Q86XJ0 350 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 FAM9CQ8IZT9 166 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 OSCP1Q8WVF1 389 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 PPWD1Q96BP3 646 aaKnown RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 RSPRY1Q96DX4 576 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 TSC22D3Q99576 134 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 PAIP1Q9H074 479 aaKnown RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 RBM38Q9H0Z9 239 aaKnown RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 EPHX3Q9H6B9 360 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 PIDD1Q9HB75 910 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 DLGAP4Q9Y2H0 992 aa9.07□□□□□ -0.96
UBE3B-207ENST00000537063 MKI67P46013 3256 aaKnown RBP9.07□□□□□ -0.96
UBE3B-207ENST00000537063 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 HIST1H2AGP0C0S8 130 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ADH5P11766 374 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 JUPP14923 745 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 HIST1H2ADP20671 130 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CASP2P42575 452 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 DGKGP49619 791 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 IMPG1Q17R60 797 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 C12orf40Q86WS4 652 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CBR4Q8N4T8 237 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 KRTCAP2Q8N6L1 136 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 METTL25Q8N6Q8 603 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 MCOLN3Q8TDD5 553 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 GLYATL1Q969I3 302 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 HIST1H2AHQ96KK5 128 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 HIST1H2AJQ99878 128 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 H2AFJQ9BTM1 129 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 OLAHQ9NV23 265 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 TRIM64CA6NLI5 447 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ARHGEF33A8MVX0 844 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 MTX2O75431 263 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SOD1P00441 154 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 MYF6P23409 242 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 NNMTP40261 264 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 MAPK9P45984 424 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 RPS14P62263 151 aaKnown RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 PHC1P78364 1004 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CYP4F3Q08477 520 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 MTAPQ13126 283 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CNPY1Q3B7I2 92 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 LIPJQ5W064 366 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 GLYATQ6IB77 296 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 IFNEQ86WN2 208 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 BEND7Q8N7W2 519 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 NAT16Q8N8M0 369 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 RASGEF1AQ8N9B8 481 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 FBXO15Q8NCQ5 510 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 WDR20Q8TBZ3 569 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ELMO1Q92556 727 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 C11orf24Q96F05 449 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 IKZF5Q9H5V7 419 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ZFP14Q9HCL3 533 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 PNPLA3Q9NST1 481 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SLC8A2Q9UPR5 921 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 A0A096LPI6 279 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 TMEM202A6NGA9 273 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SAC3D1A6NKF1 404 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 UPK1AO00322 258 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 NPC1O15118 1278 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ANXA6P08133 673 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CSTF3Q12996 717 aaKnown RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CPSF6Q16630 551 aaKnown RBP eCLIP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 MAPKAPK3Q16644 382 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SLC36A3Q495N2 470 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 BCL7AQ4VC05 210 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 PYCR3Q53H96 274 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 TCEAL5Q5H9L2 206 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 HABP4Q5JVS0 413 aaKnown RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 FRG2Q64ET8 278 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ATG9BQ674R7 924 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 XKR5Q6UX68 686 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 ZNF765Q7L2R6 523 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SPRED2Q7Z698 418 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SATL1Q86VE3 508 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 RALGPS2Q86X27 583 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SLC22A15Q8IZD6 547 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 SELENOMQ8WWX9 145 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 NSMCE2Q96MF7 247 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 FRG2BQ96QU4 278 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 CPPED1Q9BRF8 314 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-207ENST00000537063 KCNH6Q9H252 994 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 OAZ3Q9UMX2 235 aa9.06□□□□□ -0.96
UBE3B-207ENST00000537063 FAM149AA5PLN7 773 aa9.05□□□□□ -0.96
UBE3B-207ENST00000537063 FAM220BPB1ANY3 271 aa9.05□□□□□ -0.96
UBE3B-207ENST00000537063 H3BNH8 94 aa9.05□□□□□ -0.96
UBE3B-207ENST00000537063 PLOD2O00469 737 aa9.05□□□□□ -0.96
UBE3B-207ENST00000537063 LILRB5O75023 590 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms