RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PAPSS2O95340 614 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 ARIH2O95376 493 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 F9P00740 461 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ALPLP05186 524 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 GLAP06280 429 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 LTA4HP09960 611 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 ZSCAN5DPP0CG00 497 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 THRBP10828 461 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PDGFRAP16234 1089 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 MYL12AP19105 171 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 HK1P19367 917 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 C4BPBP20851 252 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 MAGP20916 626 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ATP6V1B2P21281 511 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 FGFR2P21802 821 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 KCNA5P22460 613 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CSKP41240 450 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ELK3P41970 407 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PIK3CBP42338 1070 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 RFX2P48378 723 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PCP4P48539 62 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ALDH9A1P49189 494 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 LIMK1P53667 647 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PRMT2P55345 433 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 TBX4P57082 545 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 AP1S1P61966 158 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 NCS1P62166 190 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SNRPD2P62316 118 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 GCNT1Q02742 428 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 FGL1Q08830 312 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SLC10A2Q12908 348 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 DAG1Q14118 895 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SIM2Q14190 667 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 FGL2Q14314 439 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 POU4F3Q15319 338 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SMAD2Q15796 467 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 ETFDHQ16134 617 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ZACNQ401N2 412 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 TOR1AIP1Q5JTV8 583 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 N4BP2L1Q5TBK1 243 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 MAP1SQ66K74 1059 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 KDM4DQ6B0I6 523 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PKN3Q6P5Z2 889 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 RTL10Q7L3V2 364 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 NECAB2Q7Z6G3 386 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ZZZ3Q8IYH5 903 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CMTR2Q8IYT2 770 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 SLC22A15Q8IZD6 547 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ADGRG2Q8IZP9 1017 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 OR8H2Q8N162 312 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 GHDCQ8N2G8 530 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PLD5Q8N7P1 536 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 C12orf29Q8N999 325 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 TTC29Q8NA56 475 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 IL17RCQ8NAC3 791 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CAMKVQ8NCB2 501 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 OR6C4Q8NGE1 309 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 NANPQ8TBE9 248 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ELP5Q8TE02 316 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 UBASH3BQ8TF42 649 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ZNF606Q8WXB4 792 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 HDAC10Q969S8 669 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SORCS2Q96PQ0 1159 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 MMP19Q99542 508 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SLC30A2Q9BRI3 323 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ZNF577Q9BSK1 485 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 MED18Q9BUE0 208 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PTDSS2Q9BVG9 487 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PAPOLGQ9BWT3 736 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 C1QTNF1Q9BXJ1 281 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 FTHL17Q9BXU8 183 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 GSDMCQ9BYG8 508 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ALOXE3Q9BYJ1 711 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 BCO2Q9BYV7 579 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ZYG11BQ9C0D3 744 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PCDHAC1Q9H158 963 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ALX4Q9H161 411 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 MIR1-1HGQ9H1L0 117 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 KCNH6Q9H252 994 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PPIL3Q9H2H8 161 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 TTYH1Q9H313 450 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 C11orf49Q9H6J7 331 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 EQTNQ9NQ60 294 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 DYRK4Q9NR20 520 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ASAH2Q9NR71 780 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 FAM49BQ9NUQ9 324 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 DPP3Q9NY33 737 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ERVK-18Q9QC07 812 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PURGQ9UJV8 347 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 NOCTQ9UK39 431 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 DNPEPQ9ULA0 475 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 AURKCQ9UQB9 309 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 RAP2CQ9Y3L5 183 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PCDHGA9Q9Y5G4 932 aaKnown RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 DMRT1Q9Y5R6 373 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CSADQ9Y600 493 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 TEX264Q9Y6I9 313 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 RNF215Q9Y6U7 377 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 U3KQV3 271 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CNTNAP2Q9UHC6 1331 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms