RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 POLR2CP19387 275 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 ITGA3P26006 1051 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 ARCN1P48444 511 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 PPP1CAP62136 330 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 TPM4P67936 248 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 SLC25A11Q02978 314 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 TMEM115Q12893 351 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 GPS2Q13227 327 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 NCF4Q15080 339 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 PAFAH1B3Q15102 231 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 PDK2Q15119 407 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 RPE65Q16518 533 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 SKOR2Q2VWA4 1001 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 MLIPQ5VWP3 458 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 FAM180AQ6UWF9 173 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 FAM151BQ6UXP7 276 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 CYP4V2Q6ZWL3 525 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 B4GALNT4Q76KP1 1039 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 ZC3H18Q86VM9 953 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 TICAM1Q8IUC6 712 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 GALNT16Q8N428 558 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 D2HGDHQ8N465 521 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 GLIS1Q8NBF1 620 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 ST6GALNAC3Q8NDV1 305 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 GPR26Q8NDV2 337 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 GPR150Q8NGU9 434 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 MZB1Q8WU39 189 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 LRRC45Q96CN5 670 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 SNRNP40Q96DI7 357 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 LRFN5Q96NI6 719 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 AGAP3Q96P47 875 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 GBP5Q96PP8 586 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 VPS35Q96QK1 796 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 SMAD5Q99717 465 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 FERMT1Q9BQL6 677 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 FSD1LQ9BXM9 530 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 PRDM14Q9GZV8 571 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 SRMSQ9H3Y6 488 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 DEF6Q9H4E7 631 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 TRABDQ9H4I3 376 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 MAGEE1Q9HCI5 957 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 BPIFA1Q9NP55 256 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 IGSF5Q9NSI5 407 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 ASF1BQ9NVP2 202 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 CTTNBP2NLQ9P2B4 639 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 IFT80Q9P2H3 777 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 NFKBIL1Q9UBC1 381 aaPredicted RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 TNFRSF10DQ9UBN6 386 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 SLC23A2Q9UGH3 650 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 LIMA1Q9UHB6 759 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 PTRH2Q9Y3E5 179 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 PCDHB14Q9Y5E9 798 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 HEY1Q9Y5J3 304 aa6.05□□□□□ -1.44
PABPC1-220ENST00000522658 CFAP20Q9Y6A4 193 aaKnown RBP6.05□□□□□ -1.44
PABPC1-220ENST00000522658 NBASA2RRP1 2371 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 TNRC6AQ8NDV7 1962 aaKnown RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 ICE1Q9Y2F5 2266 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 A0A0A6YYK5 440 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 GLYATL1P3A0A0U1RQE8 302 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 LRRD1A4D1F6 860 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 APOL1O14791 398 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 KDM1AO60341 852 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 POP7O75817 140 aaKnown RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 NDST3O95803 873 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 MT-CYBP00156 380 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 RNF224P0DH78 156 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 BRAFP15056 766 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 TCF4P15884 667 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 ZFXP17010 805 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 BPIP17213 487 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 LMAN1P49257 510 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 CASP6P55212 293 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 TAGLNQ01995 201 aaKnown RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 DMPKQ09013 629 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 NIPAL4Q0D2K0 466 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 CDC16Q13042 620 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 DPYSL3Q14195 570 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 NFE2L1Q14494 772 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 MYBPC3Q14896 1274 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 PDK1Q15118 436 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 ZXDCQ2QGD7 858 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 PTCHD3Q3KNS1 767 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 ATP13A5Q4VNC0 1218 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 FNBP1LQ5T0N5 605 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 C1QL3Q5VWW1 255 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 TMEM220Q6QAJ8 160 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 FAM198BQ6UWH4 519 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 BZW1Q7L1Q6 419 aaKnown RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 DET1Q7L5Y6 550 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 ZNF571Q7Z3V5 609 aaPredicted RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 GDF7Q7Z4P5 450 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 MRGPREQ86SM8 312 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 IGDCC3Q8IVU1 814 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 NXPE1Q8N323 547 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 RBMXL3Q8N7X1 1067 aaKnown RBP6.04□□□□□ -1.44
PABPC1-220ENST00000522658 NIPA2Q8N8Q9 360 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 BLOC1S5Q8TDH9 187 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 UBE2Q2Q8WVN8 375 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 LCN9Q8WX39 176 aa6.04□□□□□ -1.44
PABPC1-220ENST00000522658 CTNNBL1Q8WYA6 563 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms