RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PRPSAP1Q14558 356 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 MTFR2Q6P444 385 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 BNC2Q6ZN30 1099 aaPredicted RBP16.95■□□□□ 0.3
NUP50-218ENST00000493456 LINC00696Q6ZRV3 163 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 COX15Q7KZN9 410 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 OR11G2Q8NGC1 345 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 NR4A3Q92570 626 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 PPP1R2P1Q96PQ5 205 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 SOX17Q9H6I2 414 aaPredicted RBP16.95■□□□□ 0.3
NUP50-218ENST00000493456 LUC7LQ9NQ29 371 aaKnown RBP16.95■□□□□ 0.3
NUP50-218ENST00000493456 ENAMQ9NRM1 1142 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 IL1RAPL1Q9NZN1 696 aa16.95■□□□□ 0.3
NUP50-218ENST00000493456 HPP00738 406 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 FTH1P02794 183 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 TPBGLP0DKB5 382 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 MAGP20916 626 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 RBL1P28749 1068 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 PEBP1P30086 187 aaKnown RBP16.94■□□□□ 0.3
NUP50-218ENST00000493456 NSG1P42857 185 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 KCNK10P57789 538 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 ARG2P78540 354 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 GRM7Q14831 915 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 TCTE1Q5JU00 501 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 TAS2R42Q7RTR8 314 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 TMTC1Q8IUR5 882 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 MCATQ8IVS2 390 aaKnown RBP16.94■□□□□ 0.3
NUP50-218ENST00000493456 ZNF808Q8N4W9 903 aaPredicted RBP16.94■□□□□ 0.3
NUP50-218ENST00000493456 LRRC45Q96CN5 670 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 DNAJC1Q96KC8 554 aaKnown RBP16.94■□□□□ 0.3
NUP50-218ENST00000493456 MAGEB10Q96LZ2 347 aaPredicted RBP16.94■□□□□ 0.3
NUP50-218ENST00000493456 DNAJC7Q99615 494 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 CUTCQ9NTM9 273 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 ZNHIT6Q9NWK9 470 aaKnown RBP16.94■□□□□ 0.3
NUP50-218ENST00000493456 CTSFQ9UBX1 484 aa16.94■□□□□ 0.3
NUP50-218ENST00000493456 DYTNA2CJ06 578 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 VSTM2BA6NLU5 285 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 H7C0C1 242 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 APOC4-APOC2K7ER74 178 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 CCL22O00626 93 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 USP1O94782 785 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 ZRANB2O95218 330 aaKnown RBP eCLIP16.93■□□□□ 0.3
NUP50-218ENST00000493456 APOC2P02655 101 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 COX6B1P14854 86 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 PSMB4P28070 264 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 ATP5OP48047 213 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 CARSP49589 748 aaKnown RBP16.93■□□□□ 0.3
NUP50-218ENST00000493456 RAB28P51157 221 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 CACNG1Q06432 222 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 Q0VFX4 171 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 TCEAL1Q15170 157 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 ZNF630Q2M218 657 aaPredicted RBP16.93■□□□□ 0.3
NUP50-218ENST00000493456 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.93■□□□□ 0.3
NUP50-218ENST00000493456 SYTL3Q4VX76 610 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 ZC3H12BQ5HYM0 836 aaKnown RBP16.93■□□□□ 0.3
NUP50-218ENST00000493456 GFRALQ6UXV0 394 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 RPTNQ6XPR3 784 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 NLRP9Q7RTR0 991 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 LUZP1Q86V48 1076 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 CCDC50Q8IVM0 306 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 KATNAL2Q8IYT4 538 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 RCOR2Q8IZ40 523 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 TTC29Q8NA56 475 aaPredicted RBP16.93■□□□□ 0.3
NUP50-218ENST00000493456 CATSPER1Q8NEC5 780 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 OR1N1Q8NGS0 311 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 ELMO1Q92556 727 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 SLC22A18Q96BI1 424 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 TBL1YQ9BQ87 522 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 ARNT2Q9HBZ2 717 aa16.93■□□□□ 0.3
NUP50-218ENST00000493456 INTS7Q9NVH2 962 aaKnown RBP16.93■□□□□ 0.3
NUP50-218ENST00000493456 TRAV17A0A0B4J275 112 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 STK10O94804 968 aaKnown RBP16.92■□□□□ 0.3
NUP50-218ENST00000493456 KLHL18O94889 574 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 ACPPP15309 386 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 FDXRP22570 491 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 HTR1EP28566 365 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 PKLRP30613 574 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 TRIM14Q14142 442 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 ITIH4Q14624 930 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 DBN1Q16643 649 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 ANKRD20A2Q5SQ80 823 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 ANKRD20A1Q5TYW2 823 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 ANKRD20A3Q5VUR7 823 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 DENND5AQ6IQ26 1287 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 PACS1Q6VY07 963 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 SHISA6Q6ZSJ9 500 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 BBS12Q6ZW61 710 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 MRGPRGQ86SM5 289 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 CCDC120Q96HB5 630 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 CRB3Q9BUF7 120 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 NLE1Q9NVX2 485 aaPredicted RBP16.92■□□□□ 0.3
NUP50-218ENST00000493456 SMARCAL1Q9NZC9 954 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 INTUQ9ULD6 942 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 PLAGL1Q9UM63 463 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 CCDC168Q8NDH2 2452 aa16.92■□□□□ 0.3
NUP50-218ENST00000493456 TRGV8A0A0C4DH27 118 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 SLC5A10A0PJK1 596 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 BHMG1C9JSJ3 638 aaPredicted RBP16.91■□□□□ 0.3
NUP50-218ENST00000493456 MAP2K7O14733 419 aa16.91■□□□□ 0.3
NUP50-218ENST00000493456 TPM3P06753 285 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms