RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RCVRNP35243 200 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 HMGCLP35914 325 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 SLC1A2P43004 574 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 GLRBP48167 497 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LEPRP48357 1165 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 POLR2LP62875 67 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 OCA2Q04671 838 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 PUS10Q3MIT2 529 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LDLRAP1Q5SW96 308 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 CNSTQ6PJW8 725 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 RFLNAQ6ZTI6 216 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 USP45Q70EL2 814 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 CENPLQ8N0S6 344 aaPredicted RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 SFRP1Q8N474 314 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 IL17RCQ8NAC3 791 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 TXNDC5Q8NBS9 432 aaKnown RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 BPIFB6Q8NFQ5 453 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ARRDC3Q96B67 414 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LRIG1Q96JA1 1093 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 FAR2Q96K12 515 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 LHPPQ9H008 270 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 SIAEQ9HAT2 523 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 PCDH12Q9NPG4 1184 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 IL17CQ9P0M4 197 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 CA14Q9ULX7 337 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 ITM2BQ9Y287 266 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 IFT52Q9Y366 437 aa13.4□□□□□ -0.26
COPS7B-221ENST00000488111 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 MUC22E2RYF6 1773 aaPredicted RBP13.4□□□□□ -0.26
COPS7B-221ENST00000488111 TCF20Q9UGU0 1960 aaKnown RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 NME4O00746 187 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 NDUFB5O43674 189 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 ABCB7O75027 752 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 KLF8O95600 359 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 AHSGP02765 367 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SLC35E2BP0CK96 405 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 FCGR1AP12314 374 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 DRD1P21728 446 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 EEF1DP29692 281 aaKnown RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 RPS9P46781 194 aaKnown RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 CDKN1CP49918 316 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 IFITM3Q01628 133 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 ACVR1Q04771 509 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 BNIP2Q12982 314 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 AQP6Q13520 282 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 ENPP2Q13822 863 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SPCS2Q15005 226 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 DDIASQ8IXT1 998 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 CCNYL1Q8N7R7 359 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 TRPV3Q8NET8 790 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 FKBP10Q96AY3 582 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SLC39A3Q9BRY0 314 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 XPR1Q9UBH6 696 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 POU2F3Q9UKI9 436 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 PPIL1Q9Y3C6 166 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 PKP3Q9Y446 797 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 VCANP13611 3396 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 UPK3BL1B0FP48 263 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 UPK3BL2E5RIL1 263 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 H0YAE9 185 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 PHGDHO43175 533 aaKnown RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SLC7A4O43246 635 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SYNCRIPO60506 623 aaKnown RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 MYO1DO94832 1006 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 HSD17B1P14061 328 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 NTSR1P30989 418 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 ATP4BP51164 291 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 PTSQ03393 145 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SF3B4Q15427 424 aaKnown RBP eCLIP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 INAVAQ3KP66 663 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 ZNF789Q5FWF6 425 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SPPL2CQ8IUH8 684 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 OR4L1Q8NH43 312 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 VMP1Q96GC9 406 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 GPR78Q96P69 363 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 MCCC1Q96RQ3 725 aaPredicted RBP13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SLC6A17Q9H1V8 727 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 MFSD1Q9H3U5 465 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 ZNF639Q9UID6 485 aa13.39□□□□□ -0.27
COPS7B-221ENST00000488111 A0A1W2PQ67 120 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 TPST1O60507 370 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 GPIP06744 558 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 GSTM2P28161 218 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 OXTRP30559 389 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 MC4RP32245 332 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 RAD23AP54725 363 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 DNAJB13P59910 316 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 ZP2Q05996 745 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 SEMA3AQ14563 771 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 ADHFE1Q8IWW8 467 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 S100ZQ8WXG8 99 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 LYSMD1Q96S90 227 aa13.38□□□□□ -0.27
COPS7B-221ENST00000488111 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-221ENST00000488111 RMND5AQ9H871 391 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms