RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PRAMEF33A0A0G2JMD5 474 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C2orf92A0A1B0GVN3 265 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ELOVL7A1L3X0 281 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PRAMEF10O60809 474 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 POP4O95707 220 aaKnown RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C6P13671 934 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LHCGRP22888 699 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TMEM119Q4V9L6 283 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 IL22RA1Q8N6P7 574 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LMX1AQ8TE12 382 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ASB12Q8WXK4 309 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NINJ1Q92982 152 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ANKHQ9HCJ1 492 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MED14O60244 1454 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TEX13CA0A0J9YWL9 993 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPM1 405 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TMBIM6P55061 237 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MAZP56270 477 aaKnown RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KCNJ2P63252 427 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CPSF7Q8N684 471 aaKnown RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 INO80EQ8NBZ0 244 aaPredicted RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 METTL7AQ9H8H3 244 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CLK4Q9HAZ1 481 aaKnown RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ADAM18Q9Y3Q7 739 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MTX2O75431 263 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FABP3P05413 133 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CSTF1Q05048 431 aaKnown RBP13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ANO7Q6IWH7 933 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF554Q86TJ5 538 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CPNE9Q8IYJ1 553 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GSTCDQ8NEC7 633 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C15orf41Q9Y2V0 281 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C2CD2Q9Y426 696 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PCDHB1Q9Y5F3 818 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UNC13CQ8NB66 2214 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OLR1P78380 273 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LPCAT4Q643R3 524 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C3orf33Q6P1S2 294 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF565Q8N9K5 539 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RFKQ969G6 155 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 C2orf72A6NCS6 295 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KCNJ13O60928 360 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 NXPE2Q96DL1 559 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MTMR10Q9NXD2 777 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MLXQ9UH92 298 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TNFP01375 233 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TPTEP56180 551 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZFP69Q49AA0 526 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KIAA1161Q6NSJ0 714 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KDELC1Q6UW63 502 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF676Q8N7Q3 588 aa13□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 IRGMA1A4Y4 181 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FAM149AA5PLN7 773 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF35P13682 527 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ENDOUP21128 410 aaKnown RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GRIK5Q16478 980 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TTLL10Q6ZVT0 673 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KREMEN2Q8NCW0 462 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RIT1Q92963 219 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TVP23BQ9NYZ1 205 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 HCN2Q9UL51 889 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BAIAP2Q9UQB8 552 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 A0A0G2JMP0 313 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CAPN14A8MX76 684 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KCNU1A8MYU2 1149 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 KDM4BO94953 1096 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GNA12Q03113 381 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CACNG1Q06432 222 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ANKRD26P1Q6NSI1 321 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ARSKQ6UWY0 536 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR4M2Q8NGB6 313 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PSMG2Q969U7 264 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RBCK1Q9BYM8 510 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FBXL12Q9NXK8 326 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 YARS2Q9Y2Z4 477 aaKnown RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DPPA5A6NC42 116 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CYP1A2P05177 515 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TTMPQ5BVD1 217 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AKAP14Q86UN6 197 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR2L2Q8NH16 312 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 JOSD2Q8TAC2 188 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TCF12Q99081 682 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 HCKP08631 526 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MPIP34949 423 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 GRIK2Q13002 908 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 RBM39Q14498 530 aaKnown RBP12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TEX44Q53QW1 395 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 VWA5B1Q5TIE3 1220 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF550Q7Z398 422 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TCAIMQ8N3R3 496 aa12.99□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OR5AK3PQ8NH89 298 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms