RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TBC1D10AQ9BXI6 508 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 ABCF3Q9NUQ8 709 aa18.62■□□□□ 0.57
PSPC1-203ENST00000471658 IMPDH1P20839 514 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 PNLIPRP1P54315 467 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 CHI3L2Q15782 390 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 CSRP2Q16527 193 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 PTCHD3Q3KNS1 767 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 ZNF678Q5SXM1 525 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 SUSD1Q6UWL2 747 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 SLC22A9Q8IVM8 553 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 LRRC56Q8IYG6 542 aaPredicted RBP18.61■□□□□ 0.57
PSPC1-203ENST00000471658 SYTL1Q8IYJ3 562 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 CCNYL1Q8N7R7 359 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 ARL10Q8N8L6 244 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 LINC01555Q8NAE3 123 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 DYDC1Q8WWB3 177 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 NSUN5Q96P11 429 aaKnown RBP18.61■□□□□ 0.57
PSPC1-203ENST00000471658 DNAAF2Q9NVR5 837 aaKnown RBP18.61■□□□□ 0.57
PSPC1-203ENST00000471658 RNF215Q9Y6U7 377 aa18.61■□□□□ 0.57
PSPC1-203ENST00000471658 E7ENX8 843 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 STX16-NPEPL1H3BU86 382 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 STX16O14662 325 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CCNT2O60583 730 aaKnown RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 NEFHP12036 1026 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 TSPAN8P19075 237 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 PKLRP30613 574 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 DNAJB13P59910 316 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 TAP2Q03519 686 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 TSTA3Q13630 321 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CYP2A13Q16696 494 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CDKL4Q5MAI5 379 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ATG14Q6ZNE5 492 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 TMEM26Q6ZUK4 368 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 LCN9Q8WX39 176 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 MED8Q96G25 268 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 APOLD1Q96LR9 279 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 EDEM2Q9BV94 578 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CD244Q9BZW8 370 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ZNF395Q9H8N7 513 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 INTS7Q9NVH2 962 aaKnown RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 RAPGEFL1Q9UHV5 662 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 TMCO1Q9UM00 188 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ARID1BQ8NFD5 2236 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 LY6G6EA0A0G2JKS1 128 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ALPPL2P10696 532 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ERGP11308 486 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 GGT5P36269 586 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 FASLGP48023 281 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 SLC6A12P48065 614 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 HNMTP50135 292 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 RAB28P51157 221 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CDH13P55290 713 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 HERVK_113P63132 956 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 PLCL1Q15111 1095 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ZCCHC8Q6NZY4 707 aaKnown RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 RAB44Q7Z6P3 723 aaPredicted RBP18.6■□□□□ 0.57
PSPC1-203ENST00000471658 TCAIMQ8N3R3 496 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 OR6Y1Q8NGX8 325 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CKAP2Q8WWK9 683 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ATL1Q8WXF7 558 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 CCDC126Q96EE4 140 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 L3HYPDHQ96EM0 354 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 DUSP23Q9BVJ7 150 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 ERVK-6Q9BXR3 956 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 PITPNM3Q9BZ71 974 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 SPATA7Q9P0W8 599 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 LRIT1Q9P2V4 623 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 LNPEPQ9UIQ6 1025 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 U3KQA8 63 aa18.6■□□□□ 0.57
PSPC1-203ENST00000471658 BTN3A3O00478 584 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 PPP6CO00743 305 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 STK16O75716 305 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 SUPT7LO94864 414 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 RPS17P08708 135 aaKnown RBP18.59■□□□□ 0.57
PSPC1-203ENST00000471658 ZNF883P0CG24 379 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 ARRB2P32121 409 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 MDH1P40925 334 aaKnown RBP18.59■□□□□ 0.57
PSPC1-203ENST00000471658 BIRC2Q13490 618 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 PCBP2Q15366 365 aaKnown RBP eCLIP18.59■□□□□ 0.57
PSPC1-203ENST00000471658 AMIGO1Q86WK6 493 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 OR56A3Q8NH54 315 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 UBTD2Q8WUN7 234 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 ZFPM2Q8WW38 1151 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 ZNF75CPQ92670 426 aaPredicted RBP18.59■□□□□ 0.57
PSPC1-203ENST00000471658 SPHK1Q9NYA1 384 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 OGFRQ9NZT2 677 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 PCTPQ9UKL6 214 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 PADI4Q9UM07 663 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 SLC22A14Q9Y267 594 aa18.59■□□□□ 0.57
PSPC1-203ENST00000471658 A0A1W2PPV9 198 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 E2F3O00716 465 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 CASC3O15234 703 aaKnown RBP18.58■□□□□ 0.56
PSPC1-203ENST00000471658 GDF9O60383 454 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 WDR47O94967 919 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 TBPL1P62380 186 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 YBX1P67809 324 aaKnown RBP18.58■□□□□ 0.56
PSPC1-203ENST00000471658 PDK4Q16654 411 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 FAM219BQ5XKK7 198 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 ANKS6Q68DC2 871 aa18.58■□□□□ 0.56
PSPC1-203ENST00000471658 DBX2Q6ZNG2 339 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms