RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SLC7A5P2Q9GIP4 190 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 CLMPQ9H6B4 373 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 XKR8Q9H6D3 395 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 AKIRIN1Q9H9L7 192 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-211ENST00000471260 AP1M2Q9Y6Q5 423 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 SEC16AO15027 2179 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 A0A0J9YY10 115 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 PFDN6O15212 129 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 CD3EAPO15446 510 aaKnown RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 CEP104O60308 925 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 RFPL1O75677 317 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 SLCO2B1O94956 709 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 RPS3P23396 243 aaKnown RBP eCLIP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 CARSP49589 748 aaKnown RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 SESN2P58004 480 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 NFKB2Q00653 900 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 SLC7A5Q01650 507 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 HSPA14Q0VDF9 509 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 ABRQ12979 859 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 SLC5A12Q1EHB4 618 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 PLEKHS1Q5SXH7 462 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 LRRC8BQ6P9F7 803 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 UNC5DQ6UXZ4 953 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 CDHR3Q6ZTQ4 885 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 C19orf47Q8N9M1 422 aaKnown RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 OR1L3Q8NH93 324 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 N4BP2L2Q92802 583 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 SLC22A18Q96BI1 424 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 RNF31Q96EP0 1072 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 OR2A14Q96R47 310 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 C17orf62Q9BQA9 187 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 DHRS4Q9BTZ2 278 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 KIFC1Q9BW19 673 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 CHST8Q9H2A9 424 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 ACTR5Q9H9F9 607 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 PCMTD2Q9NV79 361 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 CDYLQ9Y232 598 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 MAN2B2Q9Y2E5 1009 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 TDRKHQ9Y2W6 561 aaKnown RBP13.04□□□□□ -0.32
HMGN1-211ENST00000471260 BOD1L1Q8NFC6 3051 aa13.04□□□□□ -0.32
HMGN1-211ENST00000471260 SPTBP11277 2137 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 NDUFS3O75489 264 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 CD63P08962 238 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 TPBGLP0DKB5 382 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 UGT2B7P16662 529 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 AGXTP21549 392 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 AOAHP28039 575 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 CASRP41180 1078 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 MAGEA6P43360 314 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 KCNJ1P48048 391 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 RAB28P51157 221 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
HMGN1-211ENST00000471260 SEMA3AQ14563 771 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 TMED2Q15363 201 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 KYNUQ16719 465 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 AGBL2Q5U5Z8 902 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 PTRHD1Q6GMV3 140 aaKnown RBP13.03□□□□□ -0.32
HMGN1-211ENST00000471260 MRNIPQ6NTE8 343 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 TTC23LQ6PF05 361 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 NAPRTQ6XQN6 538 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 SDCCAG8Q86SQ7 713 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-211ENST00000471260 PTRH1Q86Y79 214 aaKnown RBP13.03□□□□□ -0.32
HMGN1-211ENST00000471260 DCUN1D3Q8IWE4 304 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 FLVCR1-AS1Q8TAF5 88 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 ATP6V1G3Q96LB4 118 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 P2RY12Q9H244 342 aa13.03□□□□□ -0.32
HMGN1-211ENST00000471260 ZNF71Q9NQZ8 489 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-211ENST00000471260 MYO1CO00159 1063 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 ZNF749O43361 778 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 FKBP9O95302 570 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 S1PR4O95977 384 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 PVRP15151 417 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 CD9P21926 228 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 PKLRP30613 574 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 ADARP55265 1226 aaKnown RBP13.02□□□□□ -0.33
HMGN1-211ENST00000471260 TLE1Q04724 770 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 KLRB1Q12918 225 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 TTMPQ5BVD1 217 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 RNF187Q5TA31 235 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-211ENST00000471260 PRAMEF17Q5VTA0 474 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 TMEM135Q86UB9 458 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 SYTL1Q8IYJ3 562 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 PRELID2Q8N945 189 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 DENND1AQ8TEH3 1009 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 TCF12Q99081 682 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 NRTNQ99748 197 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 RAB11FIP5Q9BXF6 653 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 RASSF4Q9H2L5 321 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 SPHK1Q9NYA1 384 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 MARCH4Q9P2E8 410 aaPredicted RBP13.02□□□□□ -0.33
HMGN1-211ENST00000471260 TCFL5Q9UL49 500 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 SOX13Q9UN79 622 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 SNX7Q9UNH6 387 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 PADI2Q9Y2J8 665 aa13.02□□□□□ -0.33
HMGN1-211ENST00000471260 UTP11Q9Y3A2 253 aaKnown RBP13.02□□□□□ -0.33
HMGN1-211ENST00000471260 MAGEB16A2A368 324 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms