RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 AGTRAPQ6RW13 159 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SUSD1Q6UWL2 747 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ZNF771Q7L3S4 317 aaPredicted RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 MTDHQ86UE4 582 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 GALNT13Q8IUC8 556 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 HID1Q8IV36 788 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 KLHDC8AQ8IYD2 350 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CNPY4Q8N129 248 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CDYL2Q8N8U2 506 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ANKS4BQ8N8V4 417 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 LINC01555Q8NAE3 123 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 OR56A3Q8NH54 315 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 PPP4R1Q8TF05 950 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 GRAMD1AQ96CP6 724 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ERP27Q96DN0 273 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 MAELQ96JY0 434 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 ZNF382Q96SR6 550 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 C1QTNF7Q9BXJ2 289 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ILKAPQ9H0C8 392 aaPredicted RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 IPPKQ9H8X2 491 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 TM9SF3Q9HD45 589 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SPATA6Q9NWH7 488 aaPredicted RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 KCNK4Q9NYG8 393 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ZNF624Q9P2J8 865 aaPredicted RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 KLQ9UEF7 1012 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SLC22A14Q9Y267 594 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 TRAF6Q9Y4K3 522 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CCL27Q9Y4X3 112 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 HS3ST3A1Q9Y663 406 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ADAMTS9Q9P2N4 1935 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SPTY2D1-AS1A0A0U1RR47 76 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 TMEM221A6NGB7 291 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 C9JVG2 144 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 E7EQ34 232 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 K7EPI3 171 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 M0R296 226 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 QSOX1O00391 747 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 AZIN1O14977 448 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 KPNA5O15131 536 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 HDAC3O15379 428 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 STK16O75716 305 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 CBX6O95503 412 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 CAPN1P07384 714 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 ANXA5P08758 320 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 ENO2P09104 434 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 ALDOCP09972 364 aaKnown RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 LINC00032P0C843 101 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 TROVE2P10155 538 aaKnown RBP eCLIP8.47□□□□□ -1.05
RIF1-208ENST00000457745 ERGP11308 486 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 CD27P26842 260 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 OXTRP30559 389 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 INHBCP55103 352 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 SNRPNP63162 240 aaKnown RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 RPL6Q02878 288 aaKnown RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 XKR7Q5GH72 579 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 CATSPEREQ5SY80 951 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 SLC30A9Q6PML9 568 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 GPRIN3Q6ZVF9 776 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 TRPM8Q7Z2W7 1104 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 RAB44Q7Z6P3 723 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 THOC6Q86W42 341 aaKnown RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 SFRP1Q8N474 314 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 FBXO15Q8NCQ5 510 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 TWIST2Q8WVJ9 160 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 TFGQ92734 400 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 CCDC126Q96EE4 140 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 ZNF514Q96K75 400 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 C12orf66Q96MD2 445 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 CATSPER2Q96P56 530 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 LRRC61Q9BV99 259 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 CCDC106Q9BWC9 280 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 DPEP2Q9H4A9 486 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 MEAF6Q9HAF1 191 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 SAR1AQ9NR31 198 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 AASDHPPTQ9NRN7 309 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 TMEM74BQ9NUR3 256 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 IMP3Q9NV31 184 aaKnown RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 CUEDC1Q9NWM3 386 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 POLG2Q9UHN1 485 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 ICKQ9UPZ9 632 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 ASF1AQ9Y294 204 aa8.47□□□□□ -1.05
RIF1-208ENST00000457745 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 TDRKHQ9Y2W6 561 aaKnown RBP8.47□□□□□ -1.05
RIF1-208ENST00000457745 PCM1Q15154 2024 aa8.46□□□□□ -1.05
RIF1-208ENST00000457745 CAPN14A8MX76 684 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 PRR5-ARHGAP8B1AHC4 643 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 E7ENX8 843 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 DCXO43602 365 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 ZNF217O75362 1048 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 ESRRBO95718 433 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 CATP04040 527 aaKnown RBP8.46□□□□□ -1.06
RIF1-208ENST00000457745 S100BP04271 92 aaPredicted RBP8.46□□□□□ -1.06
RIF1-208ENST00000457745 FGF4P08620 206 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 PRR35P0CG20 571 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 MTHFD1P11586 935 aaKnown RBP8.46□□□□□ -1.06
RIF1-208ENST00000457745 CYP2A7P20853 494 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 PKLRP30613 574 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 SERPINB5P36952 375 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 SLC19A1P41440 591 aa8.46□□□□□ -1.06
RIF1-208ENST00000457745 ACTR1BP42025 376 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms