RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 DNAJC11Q9NVH1 559 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ZDHHC7Q9NXF8 308 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 RAPGEFL1Q9UHV5 662 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 PLAGL1Q9UM63 463 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 PIKFYVEQ9Y2I7 2098 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 A0A0G2JN53 185 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM202A6NGA9 273 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 AQP12BA6NM10 295 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-213ENST00000454468 G3V2T6 193 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 CXCR6O00574 342 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 CRATP43155 626 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 GPR1P46091 355 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 HSD11B1LQ7Z5J1 315 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 AQP12AQ8IXF9 295 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM132CQ8N3T6 1108 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 SLC43A3Q8NBI5 491 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 IRF7Q92985 503 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 SCRN2Q96FV2 425 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 APIPQ96GX9 242 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 P2RY13Q9BPV8 354 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 SLC32A1Q9H598 525 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 PREBQ9HCU5 417 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 SNX5Q9Y5X3 404 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 TCRBV3S1A0A5B6 114 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ZSCAN9O15535 394 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-213ENST00000454468 OPN1SWP03999 348 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 CSRP3P50461 194 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 SUOXP51687 545 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 PTSQ03393 145 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 TRAF3Q13114 568 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 MAD2L1Q13257 205 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-213ENST00000454468 HKDC1Q2TB90 917 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ZFAND4Q86XD8 727 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 METTL25Q8N6Q8 603 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 OR52J3Q8NH60 311 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 MUS81Q96NY9 551 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ASPSCR1Q9BZE9 553 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ZIM2Q9NZV7 527 aa11.68□□□□□ -0.54
SMPD4-213ENST00000454468 ABHD14A-ACY1A0A1B0GW23 586 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 DENRO43583 198 aaKnown RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 TGFB1P01137 390 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 FTH1P02794 183 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 CATP04040 527 aaKnown RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 KIR3DL1P43629 444 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 GPR33Q49SQ1 333 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 CCSMST1Q4G0I0 132 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 LDLRAP1Q5SW96 308 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 NECAB2Q7Z6G3 386 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 KLHDC8BQ8IXV7 354 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 FIBINQ8TAL6 211 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ADAMTS19Q8TE59 1207 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 UGT2B28Q9BY64 529 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 CXXC1Q9P0U4 656 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 A0A087WXM4 84 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 SYNDIG1LA6NDD5 238 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 GPIP06744 558 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 C8BP07358 591 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 PWP1Q13610 501 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ASTLQ6HA08 431 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ADNP2Q6IQ32 1131 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ERAP2Q6P179 960 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ABRAXAS1Q6UWZ7 409 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 AHI1Q8N157 1196 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 GPRC5BQ9NZH0 403 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 MAGEL2Q9UJ55 1249 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 OARD1Q9Y530 152 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ASB3Q9Y575 518 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 H3BM21 787 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 FPGTO14772 594 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 MMP20O60882 483 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 EEDO75530 441 aaKnown RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 FGBP02675 491 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 CYP2A6P11509 494 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 PRIM2P49643 509 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ATP4BP51164 291 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 CTSCP53634 463 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 PHEXP78562 749 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 C16orf72Q14CZ0 275 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 TTC23LQ6PF05 361 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 GALNT7Q86SF2 657 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 PHYKPLQ8IUZ5 450 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 OR5AK3PQ8NH89 298 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 TADA1Q96BN2 335 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 DTNBP1Q96EV8 351 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 IKZF5Q9H5V7 419 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 AMBNQ9NP70 447 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 RSL24D1Q9UHA3 163 aaKnown RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 PAIP2BQ9ULR5 123 aaKnown RBP11.67□□□□□ -0.54
SMPD4-213ENST00000454468 ASF1AQ9Y294 204 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM98Q9Y2Y6 226 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
SMPD4-213ENST00000454468 COMMD3-BMI1R4GMX3 469 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms