RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 E7EQ34 232 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 BUB1O43683 1085 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 HSF2BPO75031 334 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SRGAP2O75044 1071 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 HPP00738 406 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 PRR35P0CG20 571 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 TNFAIP3P21580 790 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 FDXRP22570 491 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SERPINA4P29622 427 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 CSNK1DP48730 415 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 NUP107P57740 925 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 POLR2LP62875 67 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 DCDP81605 110 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 HMGN5P82970 282 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 FAM174BQ3ZCQ3 159 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ZNF766Q5HY98 468 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 PRR31Q5SQ13 230 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 MANEALQ5VSG8 457 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 HLA-DQA1Q5Y7H0 255 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KAZNQ674X7 775 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KRT39Q6A163 491 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 HIBCHQ6NVY1 386 aaPredicted RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 WASH2PQ6VEQ5 465 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 TRIM72Q6ZMU5 477 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SYT8Q8NBV8 401 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 FBXL13Q8NEE6 735 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 PPP1R14CQ8TAE6 165 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SUN3Q8TAQ9 357 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 PROKR1Q8TCW9 393 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 BRIX1Q8TDN6 353 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 CPLX3Q8WVH0 158 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 PIGTQ969N2 578 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 NT5C3BQ969T7 300 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 PGAP3Q96FM1 320 aaPredicted RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 PPM1MQ96MI6 270 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 NPY6RQ99463 290 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 AGAP2Q99490 1192 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 AP1M1Q9BXS5 423 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KLC2Q9H0B6 622 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 CUEDC2Q9H467 287 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 MRM3Q9HC36 420 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 RAB20Q9NX57 234 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 IFT80Q9P2H3 777 aaPredicted RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 CDC23Q9UJX2 597 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 DNAJC13O75165 2243 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 GOLGA6CA6NDK9 693 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 GOLGA6BA6NDN3 693 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 OR52A4PA6NMU1 304 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SYT5O00445 386 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 DNAJB6O75190 326 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ONECUT2O95948 504 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 CALCAP01258 141 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 NR3C1P04150 777 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 HRGP04196 525 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ATP1A1P05023 1023 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 GOLGA6DP0CG33 693 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 MYBL2P10244 700 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 IMPDH2P12268 514 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 CD247P20963 164 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 GTF2H1P32780 548 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 RGRP47804 291 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ARSEP51690 589 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KPNA2P52292 529 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 YWHAEP62258 255 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 PMPCAQ10713 525 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 NR1I3Q14994 352 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 NKAIN1Q4KMZ8 207 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 EMC4Q5J8M3 183 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KIAA0930Q6ICG6 404 aaPredicted RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 KLHL35Q6PF15 583 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 CCDC73Q6ZRK6 1079 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 RFLNAQ6ZTI6 216 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 INTS8Q75QN2 995 aaKnown RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 LIX1LQ8IVB5 337 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KBTBD2Q8IY47 623 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 MCUQ8NE86 351 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ZFPM2Q8WW38 1151 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SCMH1Q96GD3 660 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SIGLEC12Q96PQ1 595 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 TM9SF2Q99805 663 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 MESP1Q9BRJ9 268 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ABCG8Q9H221 673 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 TNMDQ9H2S6 317 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 TP63Q9H3D4 680 aaPredicted RBP3.11□□□□□ -1.91
PMS1-215ENST00000447232 KCTD10Q9H3F6 313 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 ATP13A3Q9H7F0 1226 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 WDR54Q9H977 334 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 GP6Q9HCN6 339 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 YAE1D1Q9NRH1 226 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 KLC4Q9NSK0 619 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 TMEM248Q9NWD8 314 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 GOLGA6AQ9NYA3 693 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 SERTAD3Q9UJW9 196 aa3.11□□□□□ -1.91
PMS1-215ENST00000447232 A0A1W2PQ72 361 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 CLCA1A8K7I4 914 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 A8MV72 311 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 FGF10O15520 208 aaPredicted RBP3.1□□□□□ -1.91
PMS1-215ENST00000447232 VEGFDO43915 354 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 RAMP2O60895 175 aa3.1□□□□□ -1.91
PMS1-215ENST00000447232 DAB1O75553 588 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms