RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CA12O43570 354 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 CCNB2O95067 398 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 MEP1AQ16819 746 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 DUOXA1Q1HG43 343 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 SERPINA13PQ6UXR4 307 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF280BQ86YH2 543 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 OR2AP1Q8NGE2 309 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 TEX47Q8TBZ9 253 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 TMEM175Q9BSA9 504 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 TMLHEQ9NVH6 421 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 PRSS51A0A1B0GVH4 220 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 M0QZQ0 153 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 IDH3BO43837 385 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 DNAJB5O75953 348 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 CLDN7O95471 211 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 SLC35G4P0C7Q5 338 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 TXNL4AP83876 142 aaKnown RBP16.27■□□□□ 0.2
TCOF1-206ENST00000445265 GPAT3Q53EU6 434 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 KLHL23Q8NBE8 558 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 DRAXINQ8NBI3 349 aaPredicted RBP16.27■□□□□ 0.2
TCOF1-206ENST00000445265 ZNF597Q96LX8 424 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 TRIM8Q9BZR9 551 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 DNAAF2Q9NVR5 837 aaKnown RBP16.27■□□□□ 0.2
TCOF1-206ENST00000445265 GMEB1Q9Y692 573 aa16.27■□□□□ 0.2
TCOF1-206ENST00000445265 HMX2A2RU54 273 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 TBC1D3BA6NDS4 549 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 OR1I1O60431 355 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 STX11O75558 287 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 FGF19O95750 216 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 CAPN3P20807 821 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 RAB14P61106 215 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 ATG9BQ674R7 924 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 ATG14Q6ZNE5 492 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 DNAJB7Q7Z6W7 309 aaPredicted RBP16.27■□□□□ 0.19
TCOF1-206ENST00000445265 ZFAND4Q86XD8 727 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 ACVR1CQ8NER5 493 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 OR8D1Q8WZ84 308 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 SMURF2Q9HAU4 748 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 TOR4AQ9NXH8 423 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 RNF11Q9Y3C5 154 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 TRIM17Q9Y577 477 aa16.27■□□□□ 0.19
TCOF1-206ENST00000445265 ERAL1O75616 437 aaKnown RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 FGBP02675 491 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 EFNA1P20827 205 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CRHR2Q13324 411 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 LRP8Q14114 963 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ALKAL1Q6UXT8 129 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 NT5C3BQ969T7 300 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CSNK1G1Q9HCP0 422 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 INTS7Q9NVH2 962 aaKnown RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF10P21506 573 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 KCNAB2Q13303 367 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ANKLE1Q8NAG6 615 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 RASSF5Q8WWW0 418 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ISL2Q96A47 359 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CEP295NLQ96MC4 621 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF641Q96N77 438 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 C1QTNF7Q9BXJ2 289 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CCDC177Q9NQR7 707 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 TRPS1Q9UHF7 1281 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 USP3Q9Y6I4 520 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 J3QRK9 145 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CXCL14O95715 111 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 GLUD1P00367 558 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 C4BPBP20851 252 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 COX10Q12887 443 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 SEMA3AQ14563 771 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 USP43Q70EL4 1123 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 C16orf62Q7Z3J2 963 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 LRRTM3Q86VH5 581 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 FAR1Q8WVX9 515 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 OVCA2Q8WZ82 227 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 FBXL8Q96CD0 374 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 ATP6V1HQ9UI12 483 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 PIPSLA2A3N6 862 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 KRT87PA6NCN2 255 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 BUD31P41223 144 aaPredicted RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 DCST1Q5T197 706 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 TPRG1Q6ZUI0 275 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 PAQR9Q6ZVX9 377 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 PGBD3Q8N328 593 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 GPR150Q8NGU9 434 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 CMTM7Q96FZ5 175 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 PRDM8Q9NQV8 689 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 TMEM45AQ9NWC5 275 aa16.26■□□□□ 0.19
TCOF1-206ENST00000445265 MRPS23Q9Y3D9 190 aaKnown RBP16.26■□□□□ 0.19
TCOF1-206ENST00000445265 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 KLHL33A6NCF5 533 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 WASH4PA8MWX3 477 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 OAZ2O95190 189 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 PGLSO95336 258 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 QPRTQ15274 297 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 ZNF783Q6ZMS7 281 aa16.25■□□□□ 0.19
TCOF1-206ENST00000445265 SMYD1Q8NB12 490 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms