RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 XIRP2A4UGR9 3374 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 LIN7AO14910 233 aaPredicted RBP19.03■□□□□ 0.64
VRK2-205ENST00000432057 NPC1O15118 1278 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 PCCBP05166 539 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 IMPA1P29218 277 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 DGKQP52824 942 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 NAE1Q13564 534 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 CYP2R1Q6VVX0 501 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.03■□□□□ 0.64
VRK2-205ENST00000432057 NUDT18Q6ZVK8 323 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 DNAJB14Q8TBM8 379 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 TMEM125Q96AQ2 219 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 MED8Q96G25 268 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 C1orf109Q9NX04 203 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 SLAMF8Q9P0V8 285 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 SERGEFQ9UGK8 458 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 PCDHA9Q9Y5H5 950 aa19.03■□□□□ 0.64
VRK2-205ENST00000432057 PCYT1BQ9Y5K3 369 aaPredicted RBP19.03■□□□□ 0.64
VRK2-205ENST00000432057 IGLON5A6NGN9 336 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 C8BP07358 591 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 VARSP26640 1264 aaKnown RBP19.02■□□□□ 0.64
VRK2-205ENST00000432057 GALK1P51570 392 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 CAMK2GQ13555 558 aaPredicted RBP19.02■□□□□ 0.64
VRK2-205ENST00000432057 C2orf27AQ580R0 203 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 SUSD1Q6UWL2 747 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 ATL1Q8WXF7 558 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 EZH1Q92800 747 aaPredicted RBP19.02■□□□□ 0.64
VRK2-205ENST00000432057 HIC2Q96JB3 615 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 RIPOR3Q96MK2 946 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 ECSITQ9BQ95 431 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 ASIC5Q9NY37 505 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 TMEM98Q9Y2Y6 226 aa19.02■□□□□ 0.64
VRK2-205ENST00000432057 PRSS51A0A1B0GVH4 220 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 E7EQ34 232 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 CASQ2O14958 399 aaPredicted RBP19.01■□□□□ 0.63
VRK2-205ENST00000432057 CLGNO14967 610 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 SLC16A8O95907 504 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 CD22P20273 847 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 ATP6V1B2P21281 511 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 TIE1P35590 1138 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 MAPK9P45984 424 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 RABL3Q5HYI8 236 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 CACHD1Q5VU97 1274 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 DOK6Q6PKX4 331 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 KIAA2013Q8IYS2 634 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 COPS7BQ9H9Q2 264 aaPredicted RBP19.01■□□□□ 0.63
VRK2-205ENST00000432057 C6orf203Q9P0P8 240 aaPredicted RBP19.01■□□□□ 0.63
VRK2-205ENST00000432057 PRKAB1Q9Y478 270 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 PCM1Q15154 2024 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 K7EQS6 105 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 VEGFDO43915 354 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 POP7O75817 140 aaKnown RBP19.01■□□□□ 0.63
VRK2-205ENST00000432057 PCDH8O95206 1070 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 C1orf105O95561 183 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 HSD17B1P14061 328 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 JUPP14923 745 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 BMP8BP34820 402 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 IRF8Q02556 426 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 ADGRE1Q14246 886 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 KIAA0040Q15053 153 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 ADAMTSL4Q6UY14 1074 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 HEATR4Q86WZ0 1026 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 HOMEZQ8IX15 550 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 KLHDC8AQ8IYD2 350 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 LILRA2Q8N149 483 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 RNF175Q8N4F7 328 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 CLHC1Q8NHS4 586 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 COX14Q96I36 57 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 ZNF514Q96K75 400 aaPredicted RBP19.01■□□□□ 0.63
VRK2-205ENST00000432057 OR4K3Q96R72 315 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 ZBTB18Q99592 522 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 CLDND1Q9NY35 253 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 RIMS3Q9UJD0 308 aa19.01■□□□□ 0.63
VRK2-205ENST00000432057 A0A1W2PP55 124 aa19■□□□□ 0.63
VRK2-205ENST00000432057 DYTNA2CJ06 578 aa19■□□□□ 0.63
VRK2-205ENST00000432057 RNASEH1O60930 286 aaKnown RBP19■□□□□ 0.63
VRK2-205ENST00000432057 ADH1BP00325 375 aa19■□□□□ 0.63
VRK2-205ENST00000432057 NFE2L1Q14494 772 aa19■□□□□ 0.63
VRK2-205ENST00000432057 USP39Q53GS9 565 aaKnown RBP19■□□□□ 0.63
VRK2-205ENST00000432057 XKR6Q5GH73 641 aa19■□□□□ 0.63
VRK2-205ENST00000432057 FRG2Q64ET8 278 aa19■□□□□ 0.63
VRK2-205ENST00000432057 PNCKQ6P2M8 343 aa19■□□□□ 0.63
VRK2-205ENST00000432057 TRMT11Q7Z4G4 463 aaKnown RBP19■□□□□ 0.63
VRK2-205ENST00000432057 DHFR2Q86XF0 187 aa19■□□□□ 0.63
VRK2-205ENST00000432057 HDDC3Q8N4P3 179 aa19■□□□□ 0.63
VRK2-205ENST00000432057 DPP10Q8N608 796 aa19■□□□□ 0.63
VRK2-205ENST00000432057 OR56A3Q8NH54 315 aa19■□□□□ 0.63
VRK2-205ENST00000432057 LINC00615Q96LM1 132 aaPredicted RBP19■□□□□ 0.63
VRK2-205ENST00000432057 TMEM74Q96NL1 305 aa19■□□□□ 0.63
VRK2-205ENST00000432057 FRG2BQ96QU4 278 aa19■□□□□ 0.63
VRK2-205ENST00000432057 DPY30Q9C005 99 aa19■□□□□ 0.63
VRK2-205ENST00000432057 KLHL4Q9C0H6 718 aa19■□□□□ 0.63
VRK2-205ENST00000432057 DLGAP4Q9Y2H0 992 aa19■□□□□ 0.63
VRK2-205ENST00000432057 TCRBV3S1A0A5B6 114 aa18.99■□□□□ 0.63
VRK2-205ENST00000432057 GRXCR2A6NFK2 248 aa18.99■□□□□ 0.63
VRK2-205ENST00000432057 AP1G1O43747 822 aa18.99■□□□□ 0.63
VRK2-205ENST00000432057 BCKDHAP12694 445 aa18.99■□□□□ 0.63
VRK2-205ENST00000432057 KIR2DL1P43626 348 aaPredicted RBP18.99■□□□□ 0.63
VRK2-205ENST00000432057 SFT2D3Q587I9 215 aa18.99■□□□□ 0.63
VRK2-205ENST00000432057 LIPJQ5W064 366 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms