RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 GNPDA1P46926 289 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 STC1P52823 247 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 POLE2P56282 527 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 CDK3Q00526 305 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 CDK18Q07002 472 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 KANK2Q63ZY3 851 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 C11orf63Q6NUN7 778 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 PID1Q7Z2X4 250 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 ARL14Q8N4G2 192 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 LINC00482Q8N8I6 264 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 ARL10Q8N8L6 244 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 CDYL2Q8N8U2 506 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 SPC24Q8NBT2 197 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 GPR156Q8NFN8 814 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 OR6C4Q8NGE1 309 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 SPATA22Q8NHS9 363 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 MZB1Q8WU39 189 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 KRT35Q92764 455 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 NAT6Q93015 286 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 CLIP3Q96DZ5 547 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 PDXPQ96GD0 296 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 RBM41Q96IZ5 413 aaKnown RBP6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 OLFM3Q96PB7 478 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 AGAP2Q99490 1192 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 CCDC3Q9BQI4 270 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 FRMD8Q9BZ67 464 aaPredicted RBP6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 EPB41L4BQ9H329 900 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 FAM83DQ9H4H8 585 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 SUDS3Q9H7L9 328 aaPredicted RBP6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 SPATS2LQ9NUQ6 558 aaKnown RBP6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 TRNAU1APQ9NX07 287 aaKnown RBP6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 PKD2L2Q9NZM6 624 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 SUFUQ9UMX1 484 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 SLC17A4Q9Y2C5 497 aa6.09□□□□□ -1.43
NIF3L1-207ENST00000426253 KNL1Q8NG31 2342 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 C1orf232A0A0U1RR37 186 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 BTNL10A8MVZ5 291 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 HACD1B0YJ81 288 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 H7C0C1 242 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 CASC3O15234 703 aaKnown RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 INPP4BO15327 924 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 HNRNPRO43390 633 aaKnown RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 PMPCBO75439 489 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 CYP7B1O75881 506 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 TNFSF15O95150 251 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MT-CYBP00156 380 aaPredicted RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 FGF1P05230 155 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 IVLP07476 585 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 PTPN3P26045 913 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 AK4P27144 223 aaPredicted RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 ADCY8P40145 1251 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MC3RP41968 323 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 ATP5OP48047 213 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MARCKSL1P49006 195 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 SPINT3P49223 89 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 VAV2P52735 878 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 ITGA1P56199 1179 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 RWDD2BP57060 319 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 IL13RA1P78552 427 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 CCL7P80098 99 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 WASHC5Q12768 1159 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 KIF5AQ12840 1032 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 ILF3Q12906 894 aaKnown RBP eCLIP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 PEX6Q13608 980 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 GALNT3Q14435 633 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 PRKD1Q15139 912 aaPredicted RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 TGIF1Q15583 401 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 ISXQ2M1V0 245 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 C14orf28Q4W4Y0 310 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MANEAQ5SRI9 462 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 BORAQ6PGQ7 559 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 DOK6Q6PKX4 331 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 RBM44Q6ZP01 1051 aaKnown RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 BBS12Q6ZW61 710 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MARK2Q7KZI7 788 aaKnown RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 KIAA1328Q86T90 577 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 NRROSQ86YC3 692 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 SFTPA2Q8IWL1 248 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 SLC34A3Q8N130 599 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 MIER2Q8N344 545 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 TXLNBQ8N3L3 684 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 Q8N9G6 341 aaPredicted RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 KYQ8NBH2 561 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 ACRBPQ8NEB7 543 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 C9orf43Q8TAL5 461 aaPredicted RBP6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 TSPEARQ8WU66 669 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 HTR3CQ8WXA8 447 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 TADA1Q96BN2 335 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 GRAMD1AQ96CP6 724 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 HAUS1Q96CS2 278 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 EID2BQ96D98 161 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 HIST1H2AHQ96KK5 128 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 TRIB3Q96RU7 358 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 WDR24Q96S15 920 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 LYSMD1Q96S90 227 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 VAT1Q99536 393 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 HIST1H2AJQ99878 128 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 FERMT1Q9BQL6 677 aa6.08□□□□□ -1.44
NIF3L1-207ENST00000426253 SPATA16Q9BXB7 569 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms