RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 Q96MT0 163 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 TSPAN18Q96SJ8 248 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 INPP5KQ9BT40 448 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 ZYG11BQ9C0D3 744 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF221Q9UK13 617 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 VPS26AO75436 327 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 MAGEA2P43356 314 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 GTF2H2Q13888 395 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 OR2T5Q6IEZ7 315 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 GTF2H2CQ6P1K8 395 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 CALHM3Q86XJ0 350 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 OR2T29Q8NH02 315 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 POLR1EQ9GZS1 481 aaKnown RBP16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 GABARAPL1Q9H0R8 117 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 CCNB1IP1Q9NPC3 277 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 DDX28Q9NUL7 540 aaKnown RBP16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 PCDHGB6Q9Y5F9 930 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 HSPE1-MOB4S4R3N1 261 aa16.29■□□□□ 0.2
NPC1L1-203ENST00000423141 MBLAC1A4D2B0 266 aaPredicted RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 FAM220BPB1ANY3 271 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 PKMP14618 531 aaKnown RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 RHOQP17081 205 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 UGT2B10P36537 528 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 CTSKP43235 329 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 CDC42EP1Q00587 391 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 FAM209AQ5JX71 171 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 FAM171A1Q5VUB5 890 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 VTCN1Q7Z7D3 282 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 PLPP6Q8IY26 295 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 ENTHD1Q8IYW4 607 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 MDGA1Q8NFP4 955 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 PEX13Q92968 403 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 DMRTB1Q96MA1 342 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 OR2B2Q9GZK3 357 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 OR51E2Q9H255 320 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 NLE1Q9NVX2 485 aaPredicted RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 TMEM248Q9NWD8 314 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 FAM172BPA6NC97 362 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 SEC22BO75396 215 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 THP07101 528 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 EFNA1P20827 205 aaPredicted RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 CDKN2CP42773 168 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 GDF5P43026 501 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 CRISP3P54108 245 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 RPP38P78345 283 aaKnown RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 TIGD6Q17RP2 521 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 SMUG1Q53HV7 270 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 KIAA1614Q5VZ46 1190 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 TSPYL5Q86VY4 417 aaPredicted RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 MYEOVQ96EZ4 313 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 SH3GL1Q99961 368 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 CPPED1Q9BRF8 314 aaPredicted RBP16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 COPS4Q9BT78 406 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 CENPOQ9BU64 300 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 KRT84Q9NSB2 600 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 EHD3Q9NZN3 535 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 ERVW-1Q9UQF0 538 aa16.28■□□□□ 0.2
NPC1L1-203ENST00000423141 GUCA1CO95843 209 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 VIPP01282 170 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 SERPINF2P08697 491 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 S100A5P33763 92 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 OR2B6P58173 313 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 VLDLRP98155 873 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 ZNF235Q14590 738 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 DUSP28Q4G0W2 176 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 PPP2R2DQ66LE6 453 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 ATG16L2Q8NAA4 619 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 CHAC2Q8WUX2 184 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 PPP3R2Q96LZ3 170 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 SDHCQ99643 169 aaPredicted RBP16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 NSUN3Q9H649 340 aaKnown RBP16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 CLMPQ9H6B4 373 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 BPIFA1Q9NP55 256 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 KIF17Q9P2E2 1029 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 COMMD10Q9Y6G5 202 aa16.27■□□□□ 0.2
NPC1L1-203ENST00000423141 A0A1W2PQ67 120 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PDZK1P1A8MUH7 402 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 TNFRSF10AO00220 468 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 GPR182O15218 404 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 HOXD11P31277 338 aaPredicted RBP16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PBX3P40426 434 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 SLC19A1P41440 591 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 HTR3AP46098 478 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 HSPA7P48741 367 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 ZNF45Q02386 682 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PRKCDQ05655 676 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 PROX2Q3B8N5 592 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 ATG9BQ674R7 924 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 FBXL22Q6P050 247 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 AFTPHQ6ULP2 937 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 GLT6D1Q7Z4J2 308 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 AMER2Q8N7J2 671 aa16.27■□□□□ 0.19
NPC1L1-203ENST00000423141 EXOC2Q96KP1 924 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms