RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 CCNA2P20248 432 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 USP39Q53GS9 565 aaKnown RBP13.42□□□□□ -0.26
CTCFL-203ENST00000422109 ZCCHC8Q6NZY4 707 aaKnown RBP13.42□□□□□ -0.26
CTCFL-203ENST00000422109 GALNT18Q6P9A2 607 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 ZNF773Q6PK81 442 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 DCAF4L2Q8NA75 395 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 OR7A2PQ8NGA2 310 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 PDLIM5Q96HC4 596 aaKnown RBP13.42□□□□□ -0.26
CTCFL-203ENST00000422109 COPS8Q99627 209 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 RHNO1Q9BSD3 238 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 PCDH12Q9NPG4 1184 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 INTS6Q9UL03 887 aaKnown RBP13.42□□□□□ -0.26
CTCFL-203ENST00000422109 PPT2Q9UMR5 302 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 ST14Q9Y5Y6 855 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 A0A1W2PRU2 124 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 ZBBXA8MT70 800 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 PER2O15055 1255 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 PRSS23O95084 383 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 KRT6AP02538 564 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 KRT6BP04259 564 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 KRT6CP48668 564 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 MTA1Q13330 715 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 DGCR6Q14129 220 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 RUNDC3AQ59EK9 446 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 VTCN1Q7Z7D3 282 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 TBC1D15Q8TC07 691 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 TANKQ92844 425 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 ZNF639Q9UID6 485 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 CDH23Q9H251 3354 aa13.42□□□□□ -0.26
CTCFL-203ENST00000422109 RFXANKO14593 260 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 INMTO95050 263 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 FKBP9O95302 570 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 IGSF6O95976 241 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 NPPAP01160 153 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 NTRK1P04629 796 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 HIST1H2AGP0C0S8 130 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 EPORP19235 508 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 MSH3P20585 1137 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 HIST1H2ADP20671 130 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 LHCGRP22888 699 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CRHBPP24387 322 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 SERPINA4P29622 427 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CCR3P51677 355 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 EPHB3P54753 998 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 B4GALNT1Q00973 533 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 NFATC3Q12968 1075 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ABRQ12979 859 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 TTLL9Q3SXZ7 439 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ADNP2Q6IQ32 1131 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ANGPTL8Q6UXH0 198 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 FKBP9P1Q75LS8 142 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 SNX29P2Q8IUI4 249 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 EID3Q8N140 333 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 MED8Q96G25 268 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 HIST1H2AHQ96KK5 128 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CSF3RQ99062 836 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 HIST1H2AJQ99878 128 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 H2AFJQ9BTM1 129 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 MTG2Q9H4K7 406 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CLMPQ9H6B4 373 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 LMCD1Q9NZU5 365 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 FBXO10Q9UK96 956 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 BCL10O95999 233 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 IL6P05231 212 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ABCB1P08183 1280 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 EBLN1P0CF75 366 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 DCKP27707 260 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 DCTP40126 519 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 PLA2G16P53816 162 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 C21orf59P57076 290 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 C6orf141Q5SZD1 244 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 SPARTQ8N0X7 666 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CHDHQ8NE62 594 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 TPD52L3Q96J77 140 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 OSBPL10Q9BXB5 764 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ARMC7Q9H6L4 198 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 KAT8Q9H7Z6 458 aaKnown RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 PRDM8Q9NQV8 689 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 RASSF1Q9NS23 344 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 DNAAF2Q9NVR5 837 aaKnown RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ABCG2Q9UNQ0 655 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CORINQ9Y5Q5 1042 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 THSD7BQ9C0I4 1608 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 LOC100130705A0A1B0GUX0 176 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 H0YAE9 185 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 BOLA2-SMG1P6H3BVE0 249 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 COL6A1P12109 1028 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 PBLDP30039 288 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 MAP2K4P45985 399 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 XAF1Q6GPH4 301 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 Q6ZVU0 165 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ZNF551Q7Z340 670 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ZDHHC21Q8IVQ6 265 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CLECL1Q8IZS7 167 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 ZNF366Q8N895 744 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 CHST14Q8NCH0 376 aa13.41□□□□□ -0.26
CTCFL-203ENST00000422109 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms