RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SIGLEC10Q96LC7 697 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 FOPNLQ96NB1 174 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 RUFY1Q96T51 708 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 TRIM56Q9BRZ2 755 aaKnown RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 CHST8Q9H2A9 424 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 SLC39A10Q9ULF5 831 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 FARSAQ9Y285 508 aaKnown RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 CRYL1Q9Y2S2 319 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 HEMK1Q9Y5R4 338 aaPredicted RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 AP1M2Q9Y6Q5 423 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 BSNQ9UPA5 3926 aa14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 UBR5O95071 2799 aaPredicted RBP14.34□□□□□ -0.11
SMIM11A-203ENST00000399299 CDC14CA4D256 554 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 J3QKU1 62 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 DNALI1O14645 258 aaPredicted RBP14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 ZNF749O43361 778 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 OR2B3O76000 313 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 MATN4O95460 622 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 PTK6Q13882 451 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 UGT8Q16880 541 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 LONRF1Q17RB8 773 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 PAPD7Q5XG87 772 aaKnown RBP14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 ZNF385CQ66K41 422 aaPredicted RBP14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 FAM198BQ6UWH4 519 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 AGGF1Q8N302 714 aaeCLIP14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 DNAJC22Q8N4W6 341 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 ZBTB2Q8N680 514 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 CALML6Q8TD86 181 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 NLNQ9BYT8 704 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 DDX47Q9H0S4 455 aaKnown RBP14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 INTS7Q9NVH2 962 aaKnown RBP14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 KLHL42Q9P2K6 505 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 PLCL2Q9UPR0 1127 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 NFS1Q9Y697 457 aa14.33□□□□□ -0.12
SMIM11A-203ENST00000399299 CTAGE9A4FU28 777 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 E5RI56 91 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 HCRTR1O43613 425 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 SLC28A2O43868 658 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 PRICKLE3O43900 615 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 CAPN1P07384 714 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 CHRM3P20309 590 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 MAGP20916 626 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 PMS2P54278 862 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 RPS18P62269 152 aaKnown RBP14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 DEFB110Q30KQ9 67 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 RHBDD2Q6NTF9 364 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 TLDC1Q6P9B6 456 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 CNSTQ6PJW8 725 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 PCGF5Q86SE9 256 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 APLFQ8IW19 511 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 C9orf43Q8TAL5 461 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 SKA2Q8WVK7 121 aaPredicted RBP14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 THAP4Q8WY91 577 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 KCNJ9Q92806 393 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 RUNDC3BQ96NL0 473 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 IL17FQ96PD4 163 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 C17orf62Q9BQA9 187 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 SLC7A5P2Q9GIP4 190 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 SPATA7Q9P0W8 599 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 ASIC3Q9UHC3 531 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 CIDEBQ9UHD4 219 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 SRPK3Q9UPE1 567 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 MAN2B2Q9Y2E5 1009 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 KLK4Q9Y5K2 254 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 COMMD10Q9Y6G5 202 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 FAM169AQ9Y6X4 670 aa14.32□□□□□ -0.12
SMIM11A-203ENST00000399299 ZSCAN9O15535 394 aaPredicted RBP14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 SUV39H1O43463 412 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 PSIP1O75475 530 aaKnown RBP14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 RFPL1O75677 317 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 TTC4O95801 387 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 ERGP11308 486 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 PGAM1P18669 254 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 AGXTP21549 392 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 SLC1A2P43004 574 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 BDKRB1P46663 353 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 CLCN7P51798 805 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 GNG11P61952 73 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 CTBP1Q13363 440 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 IL10RAQ13651 578 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 NCF4Q15080 339 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 TTLL9Q3SXZ7 439 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 LCN10Q6JVE6 187 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 SYDE1Q6ZW31 735 aaPredicted RBP14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 NEK10Q6ZWH5 1172 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 CREG2Q8IUH2 290 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 DENND6AQ8IWF6 608 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 ENDOVQ8N8Q3 282 aaKnown RBP14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 LMNTD1Q8N9Z9 388 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 PROKR1Q8TCW9 393 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 DENND1AQ8TEH3 1009 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 NAPGQ99747 312 aaPredicted RBP14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 FAM167BQ9BTA0 163 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 NAT9Q9BTE0 207 aa14.31□□□□□ -0.12
SMIM11A-203ENST00000399299 DHRS4Q9BTZ2 278 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms