RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 EPORP19235 508 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 OPRL1P41146 370 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CDKN3Q16667 212 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 RGS21Q2M5E4 152 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 LYPLAL1Q5VWZ2 237 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 SLC8B1Q6J4K2 584 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 RGMBQ6NW40 437 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 RNF180Q86T96 592 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 TMEM132CQ8N3T6 1108 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 STOML2Q9UJZ1 356 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 ANAPC1Q9H1A4 1944 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 ZNF99A8MXY4 864 aaPredicted RBP18.39■□□□□ 0.53
CBX1-202ENST00000393408 WNT9AO14904 365 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 PER2O15055 1255 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 AXIN1O15169 862 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 NDUFS2O75306 463 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CLDN7O95471 211 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 PDYNP01213 254 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 TRBC1P01850 177 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 KRT6AP02538 564 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 KRT6BP04259 564 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 GSNP06396 782 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 MYCLP1P12525 358 aaPredicted RBP18.39■□□□□ 0.53
CBX1-202ENST00000393408 ELNP15502 786 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 PORP16435 677 aaPredicted RBP18.39■□□□□ 0.53
CBX1-202ENST00000393408 BPIP17213 487 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 S100A3P33764 101 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CSKP41240 450 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 MAGEA2P43356 314 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 KRT6CP48668 564 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 BCAP31P51572 246 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 RELAQ04206 551 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 RAPSNQ13702 412 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 ARHGEF7Q14155 803 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CHRNA6Q15825 494 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 SLC44A4Q53GD3 710 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CPZQ66K79 652 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 SHQ1Q6PI26 577 aaKnown RBP18.39■□□□□ 0.53
CBX1-202ENST00000393408 TRIM74Q86UV6 250 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 TRIM73Q86UV7 250 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 PARP8Q8N3A8 854 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 KLHL23Q8NBE8 558 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 OR10Q1Q8NGQ4 319 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CNIH3Q8TBE1 160 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 ALG14Q96F25 216 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 REXO5Q96IC2 774 aaKnown RBP18.39■□□□□ 0.53
CBX1-202ENST00000393408 ITCHQ96J02 903 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 ZNF347Q96SE7 839 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 C19orf43Q9BQ61 176 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 HTATIP2Q9BUP3 242 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 PARVBQ9HBI1 364 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 LATS2Q9NRM7 1088 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 CRLS1Q9UJA2 301 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 PCDHGB1Q9Y5G3 927 aa18.39■□□□□ 0.53
CBX1-202ENST00000393408 GLYATL1P3A0A0U1RQE8 302 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 SCAMP3O14828 347 aaKnown RBP18.38■□□□□ 0.53
CBX1-202ENST00000393408 MITFO75030 526 aaPredicted RBP18.38■□□□□ 0.53
CBX1-202ENST00000393408 UGT2B11O75310 529 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 OR1D2P34982 312 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 CCR3P51677 355 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 ABHD18Q0P651 414 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 ITGADQ13349 1161 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 CPSF6Q16630 551 aaKnown RBP eCLIP18.38■□□□□ 0.53
CBX1-202ENST00000393408 LDLRAP1Q5SW96 308 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 ANKRD46Q86W74 232 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 FAR1Q8WVX9 515 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 CCDC90BQ9GZT6 254 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 TMEM88BA6NKF7 163 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 M0QX08 132 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 XPNPEP2O43895 674 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 SEC24AO95486 1093 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 B3GALT4O96024 378 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 HNF1BP35680 557 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 CDKN2CP42773 168 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 EMX1Q04741 257 aaPredicted RBP18.38■□□□□ 0.53
CBX1-202ENST00000393408 LRRC8DQ7L1W4 858 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 ZDHHC21Q8IVQ6 265 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 HOMEZQ8IX15 550 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 ADGRG2Q8IZP9 1017 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 WFDC5Q8TCV5 224 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 SH3YL1Q96HL8 342 aaPredicted RBP18.38■□□□□ 0.53
CBX1-202ENST00000393408 GABARAPL1Q9H0R8 117 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 RMND5AQ9H871 391 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 MTRRQ9UBK8 725 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 DOLKQ9UPQ8 538 aa18.38■□□□□ 0.53
CBX1-202ENST00000393408 SLC10A3P09131 477 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 IGFBP5P24593 272 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 IDUAP35475 653 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 IL5RAQ01344 420 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 TTLL9Q3SXZ7 439 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 NIPAL1Q6NVV3 410 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 ZNF551Q7Z340 670 aaPredicted RBP18.37■□□□□ 0.53
CBX1-202ENST00000393408 PIWIL3Q7Z3Z3 882 aaKnown RBP18.37■□□□□ 0.53
CBX1-202ENST00000393408 CYP4Z1Q86W10 505 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 NXPE1Q8N323 547 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 PIK3C3Q8NEB9 887 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 TBC1D20Q96BZ9 403 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 PPT2Q9UMR5 302 aa18.37■□□□□ 0.53
CBX1-202ENST00000393408 SMAD6O43541 496 aaKnown RBP18.37■□□□□ 0.53
CBX1-202ENST00000393408 FTH1P02794 183 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms