RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CDK5R2Q13319 367 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 THOC7Q6I9Y2 204 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ANKS3Q6ZW76 656 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 PHYKPLQ8IUZ5 450 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 FAM217AQ8IXS0 508 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 LMNTD1Q8N9Z9 388 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 CD200R1Q8TD46 325 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 LGALS12Q96DT0 336 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ZBTB20Q9HC78 741 aaPredicted RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 CSNK1G1Q9HCP0 422 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 SLC6A13Q9NSD5 602 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 C1orf109Q9NX04 203 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 GPRC5BQ9NZH0 403 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 NINQ8N4C6 2090 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 TCRBV5S2A0A599 114 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 E2F3O00716 465 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 PRAMEF11O60813 436 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 STK16O75716 305 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ASGR1P07306 291 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 GGT1P19440 569 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 OGNP20774 298 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 NFKB2Q00653 900 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 RBM48Q5RL73 367 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 DCP2Q8IU60 420 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ADGRG2Q8IZP9 1017 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 SETD9Q8NE22 299 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 COPS4Q9BT78 406 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 WDR12Q9GZL7 423 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 NUAK2Q9H093 628 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 AASDHPPTQ9NRN7 309 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 TMEM161AQ9NX61 479 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 RHCGQ9UBD6 479 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 DUSP12Q9UNI6 340 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ABCG2Q9UNQ0 655 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 TNPO3Q9Y5L0 923 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 DNMT3AQ9Y6K1 912 aaPredicted RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 OR1D2P34982 312 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 GRK3P35626 688 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 PCBP1Q15365 356 aaKnown RBP eCLIP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 ADPRMQ3LIE5 342 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 CACTIN-AS1Q8N1I8 211 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 OR5K1Q8NHB7 308 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 CHPT1Q8WUD6 406 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 HDAC2Q92769 488 aaKnown RBP10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 BEX2Q9BXY8 128 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
NECTIN4-201ENST00000368012 FAM155AB1AL88 458 aaPredicted RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 H0YAE9 185 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 TAF4O00268 1085 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 FPGTO14772 594 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 CAPNS1P04632 268 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 RPS17P08708 135 aaKnown RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 BCKDHAP12694 445 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 AKR1A1P14550 325 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 HOXB8P17481 243 aaPredicted RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 ENGP17813 658 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 IRF8Q02556 426 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 ZNF33AQ06730 810 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 GRB14Q14449 540 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 GANABQ14697 944 aaKnown RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 TAF1AQ15573 450 aaPredicted RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 UBE2UQ5VVX9 321 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 DLEU7Q6UYE1 221 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 CEP68Q76N32 757 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 DPF3Q92784 378 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 KATNBL1Q9H079 304 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 ARNT2Q9HBZ2 717 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 TMEM9Q9P0T7 183 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 SLC22A14Q9Y267 594 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 DLGAP4Q9Y2H0 992 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 PCDHGA3Q9Y5H0 932 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 PDZK1P1A8MUH7 402 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 B4GALT3O60512 393 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 CCNKO75909 580 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 EPN2O95208 641 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 ANXA5P08758 320 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 BMP4P12644 408 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 DNAJB1P25685 340 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 GSTM2P28161 218 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 SLC6A4P31645 630 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 CDKN2CP42773 168 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 PSMD8P48556 350 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 FOXM1Q08050 763 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 CLCA4Q14CN2 919 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 INAVAQ3KP66 663 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 USP39Q53GS9 565 aaKnown RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 NEK10Q6ZWH5 1172 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 AKAP14Q86UN6 197 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 CLECL1Q8IZS7 167 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 SCAIQ8N9R8 606 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 UBASH3BQ8TF42 649 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 STARD8Q92502 1023 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 DACT3Q96B18 629 aaPredicted RBP10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 Q96MT0 163 aa10.77□□□□□ -0.69
NECTIN4-201ENST00000368012 ALPK1Q96QP1 1244 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms