RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 PRR23BQ6ZRT6 265 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 KBTBD6Q86V97 674 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 HEATR4Q86WZ0 1026 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 TRAPPC5Q8IUR0 188 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 CFAP206Q8IYR0 622 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 DPP10Q8N608 796 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 SNX31Q8N9S9 440 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 FNDC5Q8NAU1 212 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 WDR34Q96EX3 536 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 MSANTD3Q96H12 275 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
LMO1-201ENST00000335790 FCRL1Q96LA6 429 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 PKP4Q99569 1192 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 ACTL8Q9H568 366 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 PREBQ9HCU5 417 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 INTS7Q9NVH2 962 aaKnown RBP13.12□□□□□ -0.31
LMO1-201ENST00000335790 KLQ9UEF7 1012 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 ZNF490Q9ULM2 529 aaPredicted RBP13.12□□□□□ -0.31
LMO1-201ENST00000335790 FZD4Q9ULV1 537 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 SLC22A14Q9Y267 594 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 BDP1A6H8Y1 2624 aa13.12□□□□□ -0.31
LMO1-201ENST00000335790 A0A1W2PP55 124 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 ASPDHA6ND91 283 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 FAM86C2PA6NEL3 165 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 E7ENX8 843 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 H0YIV9 168 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 NR5A2O00482 541 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 ACOT8O14734 319 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 SORBS2O94875 1100 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 PCDH8O95206 1070 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 ANP32DO95626 131 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 EGFP01133 1207 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 IL12AP29459 219 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 HNF4AP41235 474 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 POLR2JP52435 117 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 PNLIPRP1P54315 467 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 UFM1P61960 85 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 TRAP1Q12931 704 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 PRKG2Q13237 762 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 FGL2Q14314 439 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 RFTN2Q52LD8 501 aaPredicted RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 CMPK2Q5EBM0 449 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 TMEM31Q5JXX7 168 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 GRHL2Q6ISB3 625 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 CYP20A1Q6UW02 462 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 THOC6Q86W42 341 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 LRRC56Q8IYG6 542 aaPredicted RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 RGL4Q8IZJ4 473 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 SGPP1Q9BX95 441 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 ZDHHC5Q9C0B5 715 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 MKRN2Q9H000 416 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 SPAG4Q9NPE6 437 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 FARSBQ9NSD9 589 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 C1orf109Q9NX04 203 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 LEF1Q9UJU2 399 aaPredicted RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 ANGPTL2Q9UKU9 493 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 EIF3LQ9Y262 564 aaKnown RBP13.11□□□□□ -0.31
LMO1-201ENST00000335790 DOCK9Q9BZ29 2069 aa13.11□□□□□ -0.31
LMO1-201ENST00000335790 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 C2CD4DB7Z1M9 353 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 C10orf142B7Z368 130 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 H0Y3Z8 333 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 FFAR3O14843 346 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 ANGPT2O15123 496 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 KMOO15229 486 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 GPR42O15529 346 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 KCNJ13O60928 360 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 SLC16A8O95907 504 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 PDYNP01213 254 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 DNTTP04053 509 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 HOXC4P09017 264 aaPredicted RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 HSD3B1P14060 373 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 HOXB2P14652 356 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 ANPEPP15144 967 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 XRCC1P18887 633 aaPredicted RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 HSD3B2P26439 372 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 PBLDP30039 288 aaPredicted RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 ARL1P40616 181 aaPredicted RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 BDKRB1P46663 353 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 SEC13P55735 322 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 KCNK10P57789 538 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 CSTF3Q12996 717 aaKnown RBP13.1□□□□□ -0.31
LMO1-201ENST00000335790 CHIT1Q13231 466 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 VPS26BQ4G0F5 336 aa13.1□□□□□ -0.31
LMO1-201ENST00000335790 CCSMST1Q4G0I0 132 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms