RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 MAP10Q9P2G4 905 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 DHCR7Q9UBM7 475 aaKnown RBP13.7□□□□□ -0.22
RPP40-201ENST00000319533 NDOR1Q9UHB4 597 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 PLCL2Q9UPR0 1127 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 CDYLQ9Y232 598 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 PCDHGA10Q9Y5H3 936 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 CRYBG3Q68DQ2 2970 aa13.7□□□□□ -0.22
RPP40-201ENST00000319533 ANKUB1A6NFN9 424 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 METTL18O95568 372 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 FTH1P02794 183 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 PEBP1P30086 187 aaKnown RBP13.69□□□□□ -0.22
RPP40-201ENST00000319533 KIR2DS3Q14952 304 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 RPS6KA1Q15418 735 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 DEFB110Q30KQ9 67 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 ZNF787Q6DD87 383 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 IGFL2Q6UWQ7 119 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 ZADH2Q8N4Q0 377 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 ZNF655Q8N720 491 aaPredicted RBP13.69□□□□□ -0.22
RPP40-201ENST00000319533 LRRC40Q9H9A6 602 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 SMARCAL1Q9NZC9 954 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 NTNG1Q9Y2I2 539 aa13.69□□□□□ -0.22
RPP40-201ENST00000319533 COPG1Q9Y678 874 aaKnown RBP13.69□□□□□ -0.22
RPP40-201ENST00000319533 AGPSO00116 658 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 SNRNP200O75643 2136 aaKnown RBP13.68□□□□□ -0.22
RPP40-201ENST00000319533 TPH1P17752 444 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 COL8A1P27658 744 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 FOXN2P32314 431 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 AIMP2Q13155 320 aaKnown RBP13.68□□□□□ -0.22
RPP40-201ENST00000319533 KLF1Q13351 362 aaPredicted RBP13.68□□□□□ -0.22
RPP40-201ENST00000319533 ARHGEF18Q6ZSZ5 1173 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 CUZD1Q86UP6 607 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 TICAM1Q8IUC6 712 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 TMEM151BQ8IW70 566 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 ELMO1Q92556 727 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 FKBP10Q96AY3 582 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 TRIM44Q96DX7 344 aaPredicted RBP13.68□□□□□ -0.22
RPP40-201ENST00000319533 C5orf34Q96MH7 638 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 NDC1Q9BTX1 674 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 MENTQ9BUN1 341 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 ILKAPQ9H0C8 392 aaPredicted RBP13.68□□□□□ -0.22
RPP40-201ENST00000319533 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
RPP40-201ENST00000319533 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 EURLQ9NYK6 297 aa13.68□□□□□ -0.22
RPP40-201ENST00000319533 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 LRBAP50851 2863 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 ABCA12Q86UK0 2595 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 KDM1AO60341 852 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 ALBP02768 609 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 ITGAXP20702 1163 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 MMP11P24347 488 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
RPP40-201ENST00000319533 PKLRP30613 574 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 FOXL2P58012 376 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 POU6F1Q14863 301 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 DNAJC21Q5F1R6 531 aaKnown RBP13.67□□□□□ -0.22
RPP40-201ENST00000319533 OVCH1Q7RTY7 1134 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 C17orf53Q8N3J3 647 aaPredicted RBP13.67□□□□□ -0.22
RPP40-201ENST00000319533 DENND1AQ8TEH3 1009 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 DLG3Q92796 817 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 WDR77Q9BQA1 342 aaPredicted RBP13.67□□□□□ -0.22
RPP40-201ENST00000319533 FRMD8P1Q9BZ68 369 aaPredicted RBP13.67□□□□□ -0.22
RPP40-201ENST00000319533 SLC26A1Q9H2B4 701 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 WDR54Q9H977 334 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 ZKSCAN5Q9Y2L8 839 aa13.67□□□□□ -0.22
RPP40-201ENST00000319533 TDRKHQ9Y2W6 561 aaKnown RBP13.67□□□□□ -0.22
RPP40-201ENST00000319533 CCDC162PA2VCL2 907 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 ENO4A6NNW6 628 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 MASP2O00187 686 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 PSMD3O43242 534 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 OR56A5P0C7T3 313 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 RAB28P51157 221 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 ARSFP54793 590 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 SLC9A5Q14940 896 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 CYP2A13Q16696 494 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 P3H1Q32P28 736 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 MEI1Q5TIA1 1274 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 MCATQ8IVS2 390 aaKnown RBP13.66□□□□□ -0.22
RPP40-201ENST00000319533 SLC22A15Q8IZD6 547 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 FAM71DQ8N9W8 422 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 LINC01555Q8NAE3 123 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 ST6GALNAC3Q8NDV1 305 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 SLC35B2Q8TB61 432 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 PPP4R1Q8TF05 950 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 ZNF285Q96NJ3 590 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 SPSB2Q99619 263 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 SLC6A20Q9NP91 592 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 DOCK10Q96BY6 2186 aa13.66□□□□□ -0.22
RPP40-201ENST00000319533 A0A1B0GX78 115 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 CCDC78A2IDD5 438 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 OR51F1A6NGY5 319 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 SOCS6O14544 535 aa13.65□□□□□ -0.22
RPP40-201ENST00000319533 GPC4O75487 556 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms