RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CBSP35520 551 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 VAC14Q08AM6 782 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 CBLBQ13191 982 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 TIPARPQ7Z3E1 657 aaKnown RBP24.29■■□□□ 1.48
PDF-201ENST00000288022 GALNT7Q86SF2 657 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 BPHLQ86WA6 291 aaPredicted RBP24.29■■□□□ 1.48
PDF-201ENST00000288022 GPATCH11Q8N954 259 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 FBXO25Q8TCJ0 367 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 SLC22A18Q96BI1 424 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 SPRY4Q9C004 299 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 TEX51A0A1B0GUA7 166 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 ESYT3A0FGR9 886 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 ARHGEF33A8MVX0 844 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 PSIP1O75475 530 aaKnown RBP24.28■■□□□ 1.48
PDF-201ENST00000288022 DLGAP3O95886 979 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 MPC1LP0DKB6 136 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 MAP4P27816 1152 aaKnown RBP24.28■■□□□ 1.48
PDF-201ENST00000288022 SLC5A12Q1EHB4 618 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 GPR155Q7Z3F1 870 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 C19orf47Q8N9M1 422 aaKnown RBP24.28■■□□□ 1.48
PDF-201ENST00000288022 FLVCR1-AS1Q8TAF5 88 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 ZNF501Q96CX3 271 aaPredicted RBP24.28■■□□□ 1.48
PDF-201ENST00000288022 MOCS1Q9NZB8 636 aa24.28■■□□□ 1.48
PDF-201ENST00000288022 CTAGE15A4D2H0 777 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 TIAF1O95411 115 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 CTAGE8P0CG41 777 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 SSTR1P30872 391 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 SKIV2L2P42285 1042 aaKnown RBP24.27■■□□□ 1.48
PDF-201ENST00000288022 RGS4P49798 205 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 CDKN2DP55273 166 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 PWWP2BQ6NUJ5 590 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 ZDHHC24Q6UX98 284 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 C6orf15Q6UXA7 325 aaPredicted RBP24.27■■□□□ 1.48
PDF-201ENST00000288022 CTAGE6Q86UF2 777 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 TMEM126BQ8IUX1 230 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 CTAGE4Q8IX94 777 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 FAM20CQ8IXL6 584 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 ESX1Q8N693 406 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 GALNT6Q8NCL4 622 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 OR9A1PQ8NGU1 263 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 OR8K5Q8NH50 307 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 N4BP2L2Q92802 583 aaPredicted RBP24.27■■□□□ 1.48
PDF-201ENST00000288022 SPATA7Q9P0W8 599 aa24.27■■□□□ 1.48
PDF-201ENST00000288022 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.27■■□□□ 1.48
PDF-201ENST00000288022 CORO1CQ9ULV4 474 aaPredicted RBP24.27■■□□□ 1.48
PDF-201ENST00000288022 TMEM150CB9EJG8 249 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 SYF2O95926 243 aaKnown RBP24.26■■□□□ 1.47
PDF-201ENST00000288022 GUCY2DQ02846 1103 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 PDAP1Q13442 181 aaKnown RBP24.26■■□□□ 1.47
PDF-201ENST00000288022 SF1Q15637 639 aaKnown RBP24.26■■□□□ 1.47
PDF-201ENST00000288022 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.26■■□□□ 1.47
PDF-201ENST00000288022 HECTD2Q5U5R9 776 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 PIWIL4Q7Z3Z4 852 aaKnown RBP24.26■■□□□ 1.47
PDF-201ENST00000288022 STRA8Q7Z7C7 330 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 MMGT1Q8N4V1 131 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 KIAA1143Q96AT1 154 aaPredicted RBP24.26■■□□□ 1.47
PDF-201ENST00000288022 TCTN2Q96GX1 697 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 FCRL4Q96PJ5 515 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 TWSG1Q9GZX9 223 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 SYTL2Q9HCH5 934 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 PSAT1Q9Y617 370 aa24.26■■□□□ 1.47
PDF-201ENST00000288022 K7ENP7 123 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 EIF3FO00303 357 aaPredicted RBP24.25■■□□□ 1.47
PDF-201ENST00000288022 EFSO43281 561 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 SCRG1O75711 98 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 TIAL1Q01085 375 aaKnown RBP eCLIP24.25■■□□□ 1.47
PDF-201ENST00000288022 MAP7Q14244 749 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 LRRC8EQ6NSJ5 796 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 FAM45BPQ6NSW5 357 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 INO80CQ6PI98 192 aaPredicted RBP24.25■■□□□ 1.47
PDF-201ENST00000288022 PAQR3Q6TCH7 311 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 CDHR3Q6ZTQ4 885 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 SLC26A11Q86WA9 606 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 ZSCAN1Q8NBB4 408 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 FAM45AQ8TCE6 357 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 DENND1AQ8TEH3 1009 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 EEF1AKMT1Q8WVE0 214 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 ASB11Q8WXH4 323 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 PHACTR1Q9C0D0 580 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 GPN2Q9H9Y4 310 aaPredicted RBP24.25■■□□□ 1.47
PDF-201ENST00000288022 NSMCE4AQ9NXX6 385 aa24.25■■□□□ 1.47
PDF-201ENST00000288022 RALYQ9UKM9 306 aaKnown RBP24.25■■□□□ 1.47
PDF-201ENST00000288022 DSPP15924 2871 aaKnown RBP24.25■■□□□ 1.47
PDF-201ENST00000288022 ZBTB14O43829 449 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 NTRK1P04629 796 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 LIFP15018 202 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 SAT1P21673 171 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 OAS2P29728 719 aaKnown RBP24.24■■□□□ 1.47
PDF-201ENST00000288022 ABHD18Q0P651 414 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 TSTA3Q13630 321 aaPredicted RBP24.24■■□□□ 1.47
PDF-201ENST00000288022 ZIC1Q15915 447 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 CYHR1Q6ZMK1 362 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 UBE2R2Q712K3 238 aaPredicted RBP24.24■■□□□ 1.47
PDF-201ENST00000288022 MYO1HQ8N1T3 1032 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 NOA1Q8NC60 698 aaKnown RBP24.24■■□□□ 1.47
PDF-201ENST00000288022 CDKL2Q92772 493 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 PKP4Q99569 1192 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 FAM60AQ9NP50 221 aa24.24■■□□□ 1.47
PDF-201ENST00000288022 INTS7Q9NVH2 962 aaKnown RBP24.24■■□□□ 1.47
PDF-201ENST00000288022 SERTAD3Q9UJW9 196 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms