RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 RGS10O43665 173 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 PCDHGA12O60330 932 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 FAM20BO75063 409 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 SEC22BO75396 215 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 HOXB9P17482 250 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 MAGEA2P43356 314 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 PURAQ00577 322 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 CREMQ03060 361 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 PRSS48Q7RTY5 328 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 SIGLEC11Q96RL6 698 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 BOCQ9BWV1 1114 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 HOXD1Q9GZZ0 328 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 P2RY12Q9H244 342 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 DCSTAMPQ9H295 470 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 TPK1Q9H3S4 243 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 GPRC5BQ9NZH0 403 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 EIF3LQ9Y262 564 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 TPRKBQ9Y3C4 175 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 CCL15-CCL14A0A0B4J2E2 113 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 C2orf81A6NN90 581 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 SSX4O60224 188 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 OTCP00480 354 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 BCKDHAP12694 445 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 LPOP22079 712 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 TACR1P25103 407 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 SERPINB1P30740 379 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 GRK3P35626 688 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 VLDLRP98155 873 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 CDC20Q12834 499 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 CCL15Q16663 113 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 DNASE1L2Q92874 299 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 ZHX1-C8orf76Q96EF9 292 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 PDLIM5Q96HC4 596 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 SPATA7Q9P0W8 599 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 ZNF490Q9ULM2 529 aaPredicted RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 NDRG4Q9ULP0 352 aaKnown RBP13.09□□□□□ -0.31
H3F3B-201ENST00000254810 PPT2Q9UMR5 302 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 COMMD10Q9Y6G5 202 aa13.09□□□□□ -0.31
H3F3B-201ENST00000254810 A0A096LPI6 279 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 M0R082 166 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 INSIG1O15503 277 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 IL6P05231 212 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 CR2P20023 1033 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 TACR2P21452 398 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PSMA3P25788 255 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 C21orf33P30042 268 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 TTPAP49638 278 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 TUSC3Q13454 348 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 ATG9BQ674R7 924 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 SPATC1Q76KD6 591 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 SNX20Q7Z614 316 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 ZNF280BQ86YH2 543 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PLD3Q8IV08 490 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 TTC29Q8NA56 475 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 APOL5Q9BWW9 433 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 GABARAPL1Q9H0R8 117 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PDP1Q9P0J1 537 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.325e-8■■□□□ 11.5
H3F3B-201ENST00000254810 ATP11BQ9Y2G3 1177 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 NOX1Q9Y5S8 564 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 DSCR3O14972 297 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 IGLV3-27P01718 113 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 F11P03951 625 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PCYT1AP49585 367 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 SGSHP51688 502 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 YBEYP58557 167 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 RFX4Q33E94 735 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 POC5Q8NA72 575 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 TXNDC15Q96J42 360 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PSKH2Q96QS6 385 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 CINPQ9BW66 212 aaPredicted RBP13.08□□□□□ -0.32
H3F3B-201ENST00000254810 LRTM1Q9HBL6 345 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 NOD1Q9Y239 953 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 RAI2Q9Y5P3 530 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 PRSS21Q9Y6M0 314 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 CHD5Q8TDI0 1954 aa13.08□□□□□ -0.32
H3F3B-201ENST00000254810 TRPM7Q96QT4 1865 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 METTL15A6NJ78 407 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 LOC730098B7Z3J9 87 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 RGS14O43566 566 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 RFPL2O75678 378 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 LRATO95237 230 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 PGLSO95336 258 aa13.07□□□□□ -0.32
H3F3B-201ENST00000254810 DLGAP3O95886 979 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms