RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NXNQ6DKJ4 435 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 SLC30A9Q6PML9 568 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 CCDC121Q6ZUS5 278 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 THOC6Q86W42 341 aaKnown RBP18.05■□□□□ 0.48
SNX17-201ENST00000233575 DCUN1D3Q8IWE4 304 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 SYTL1Q8IYJ3 562 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 CADM4Q8NFZ8 388 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 OR56A3Q8NH54 315 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 ATL1Q8WXF7 558 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 HBEGFQ99075 208 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 DNAJC11Q9NVH1 559 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 GIMAP2Q9UG22 337 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 FANCMQ8IYD8 2048 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 SPTY2D1-AS1A0A0U1RR47 76 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 SERPINA6P08185 405 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 LINC00032P0C843 101 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 UROSP10746 265 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 NUDT1P36639 197 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 TBPL1P62380 186 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 USP39Q53GS9 565 aaKnown RBP18.05■□□□□ 0.48
SNX17-201ENST00000233575 MYLK4Q86YV6 388 aaPredicted RBP18.05■□□□□ 0.48
SNX17-201ENST00000233575 DDIASQ8IXT1 998 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 LRRC56Q8IYG6 542 aaPredicted RBP18.05■□□□□ 0.48
SNX17-201ENST00000233575 C2orf73Q8N5S3 287 aaPredicted RBP18.05■□□□□ 0.48
SNX17-201ENST00000233575 SPACA7Q96KW9 195 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 MARK4Q96L34 752 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 NTMT1Q9BV86 223 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 MIR1-1HGQ9H1L0 117 aa18.05■□□□□ 0.48
SNX17-201ENST00000233575 G3BP2Q9UN86 482 aaKnown RBP18.05■□□□□ 0.48
SNX17-201ENST00000233575 LAMA1P25391 3075 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 BDP1A6H8Y1 2624 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 TOR1BO14657 336 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 FFAR3O14843 346 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 GPR42O15529 346 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 KCNJ13O60928 360 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 AOC1P19801 751 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 ACTR1BP42025 376 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 ACTR1AP61163 376 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 TSTA3Q13630 321 aaPredicted RBP18.04■□□□□ 0.48
SNX17-201ENST00000233575 UAP1L1Q3KQV9 507 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 SUSD1Q6UWL2 747 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 ACAD11Q709F0 780 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 ARMCX6Q7L4S7 300 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 NRROSQ86YC3 692 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 METTL6Q8TCB7 284 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 RAD51AP1Q96B01 352 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 KLHDC7BQ96G42 594 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 FERD3LQ96RJ6 166 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 SAR1AQ9NR31 198 aa18.04■□□□□ 0.48
SNX17-201ENST00000233575 MEI4A8MW99 385 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 E7ENX8 843 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 MAP3K13O43283 966 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 CELA2BP08218 269 aaPredicted RBP18.03■□□□□ 0.48
SNX17-201ENST00000233575 NCF2P19878 526 aaPredicted RBP18.03■□□□□ 0.48
SNX17-201ENST00000233575 FNTBP49356 437 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 TAP2Q03519 686 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 MAMSTRQ6ZN01 415 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 TREML1Q86YW5 311 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 IER2Q9BTL4 223 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 MENTQ9BUN1 341 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 TRIT1Q9H3H1 467 aaKnown RBP18.03■□□□□ 0.48
SNX17-201ENST00000233575 ACTR8Q9H981 624 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 SH2B3Q9UQQ2 575 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 DGKBQ9Y6T7 804 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 TDRD6O60522 2096 aaKnown RBP18.03■□□□□ 0.48
SNX17-201ENST00000233575 NCOR1O75376 2440 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 SDK1Q7Z5N4 2213 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 CBX6O95503 412 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 HGFP14210 728 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 PNLIPRP1P54315 467 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 CDC16Q13042 620 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 PTK2BQ14289 1009 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 RPE65Q16518 533 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 TTC23LQ6PF05 361 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 YTHDF3Q7Z739 585 aaKnown RBP18.03■□□□□ 0.48
SNX17-201ENST00000233575 KIRREL3Q8IZU9 778 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 MAGEC3Q8TD91 643 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 CCDC106Q9BWC9 280 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 PCED1AQ9H1Q7 454 aa18.03■□□□□ 0.48
SNX17-201ENST00000233575 FARSBQ9NSD9 589 aaKnown RBP18.03■□□□□ 0.48
SNX17-201ENST00000233575 A0A1W2PR77 199 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 PRR5-ARHGAP8B1AHC4 643 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 E7EQ34 232 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 CCDC22O60826 627 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 KIAA0754O94854 1291 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 CLDN9O95484 217 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 EBLN1P0CF75 366 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 CD1EP15812 388 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 BNIP1Q12981 228 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 LRP8Q14114 963 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 LARP4Q71RC2 724 aaKnown RBP eCLIP18.02■□□□□ 0.483e-7■■■□□ 18.7
SNX17-201ENST00000233575 KLHDC8AQ8IYD2 350 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 TBC1D21Q8IYX1 336 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 OR2T11Q8NH01 316 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 CATSPER2Q96P56 530 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 CCDC28BQ9BUN5 200 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 NUSAP1Q9BXS6 441 aaKnown RBP18.02■□□□□ 0.48
SNX17-201ENST00000233575 AKTIPQ9H8T0 292 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 ARL8BQ9NVJ2 186 aa18.02■□□□□ 0.48
SNX17-201ENST00000233575 TRNAU1APQ9NX07 287 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms