RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ATP7AQ04656 1500 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 CCAR2Q8N163 923 aaKnown RBP20.89■□□□□ 0.93
SCARB2-223ENST00000640640 TRIM5Q9C035 493 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 GRPEL1Q9HAV7 217 aa20.89■□□□□ 0.93
SCARB2-223ENST00000640640 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 TMOD3Q9NYL9 352 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 CTNNA3Q9UI47 895 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 NPATQ14207 1427 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 YTHDC2Q9H6S0 1430 aaKnown RBP20.88■□□□□ 0.93
SCARB2-223ENST00000640640 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 PHACTR3Q96KR7 559 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 FMNL2Q96PY5 1086 aa20.88■□□□□ 0.93
SCARB2-223ENST00000640640 CCDC8Q9H0W5 538 aaPredicted RBP20.88■□□□□ 0.93
SCARB2-223ENST00000640640 ANXA1P04083 346 aa20.87■□□□□ 0.93
SCARB2-223ENST00000640640 NUCB1Q02818 461 aa20.87■□□□□ 0.93
SCARB2-223ENST00000640640 PIK3R4Q99570 1358 aa20.87■□□□□ 0.93
SCARB2-223ENST00000640640 IPO7O95373 1038 aaKnown RBP20.87■□□□□ 0.93
SCARB2-223ENST00000640640 PRPF40BQ6NWY9 871 aaKnown RBP20.87■□□□□ 0.93
SCARB2-223ENST00000640640 IFNL2Q8IZJ0 200 aa20.87■□□□□ 0.93
SCARB2-223ENST00000640640 PPP1R42Q7Z4L9 355 aa20.86■□□□□ 0.93
SCARB2-223ENST00000640640 MRPL50Q8N5N7 158 aaKnown RBP20.86■□□□□ 0.93
SCARB2-223ENST00000640640 A0A087WZG4 1122 aa20.86■□□□□ 0.93
SCARB2-223ENST00000640640 CCDC173Q0VFZ6 552 aa20.86■□□□□ 0.93
SCARB2-223ENST00000640640 NOC3LQ8WTT2 800 aaKnown RBP20.86■□□□□ 0.93
SCARB2-223ENST00000640640 MAP3K2Q9Y2U5 619 aa20.86■□□□□ 0.93
SCARB2-223ENST00000640640 VAMP4O75379 141 aa20.85■□□□□ 0.93
SCARB2-223ENST00000640640 PCMTD1Q96MG8 357 aaPredicted RBP20.85■□□□□ 0.93
SCARB2-223ENST00000640640 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
SCARB2-223ENST00000640640 OLFM4Q6UX06 510 aa20.85■□□□□ 0.93
SCARB2-223ENST00000640640 CADPS2Q86UW7 1296 aa20.85■□□□□ 0.93
SCARB2-223ENST00000640640 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
SCARB2-223ENST00000640640 ABCC1P33527 1531 aa20.84■□□□□ 0.93
SCARB2-223ENST00000640640 IDH1O75874 414 aaKnown RBP20.84■□□□□ 0.93
SCARB2-223ENST00000640640 SLC3A2P08195 630 aaKnown RBP20.84■□□□□ 0.93
SCARB2-223ENST00000640640 ECHDC1Q9NTX5 307 aa20.84■□□□□ 0.93
SCARB2-223ENST00000640640 ZMYM3Q14202 1370 aa20.84■□□□□ 0.93
SCARB2-223ENST00000640640 ME1P48163 572 aa20.84■□□□□ 0.93
SCARB2-223ENST00000640640 METTL24Q5JXM2 366 aa20.84■□□□□ 0.93
SCARB2-223ENST00000640640 TTC22Q5TAA0 569 aa20.84■□□□□ 0.93
SCARB2-223ENST00000640640 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.93
SCARB2-223ENST00000640640 CCDC192P0DO97 292 aa20.83■□□□□ 0.93
SCARB2-223ENST00000640640 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.93
SCARB2-223ENST00000640640 TRIM22Q8IYM9 498 aa20.83■□□□□ 0.92
SCARB2-223ENST00000640640 JMYQ8N9B5 988 aa20.83■□□□□ 0.92
SCARB2-223ENST00000640640 IL27Q8NEV9 243 aa20.83■□□□□ 0.92
SCARB2-223ENST00000640640 SPATA31E1Q6ZUB1 1445 aa20.83■□□□□ 0.92
SCARB2-223ENST00000640640 STK11IPQ8N1F8 1099 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 PDIA4P13667 645 aaKnown RBP20.82■□□□□ 0.92
SCARB2-223ENST00000640640 CHRNA2Q15822 529 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 FAM13BQ9NYF5 915 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
SCARB2-223ENST00000640640 TSHZ3Q63HK5 1081 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 FLT4P35916 1363 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 CCDC83Q8IWF9 413 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 AKAP2Q9Y2D5 859 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 ZFYVE9O95405 1425 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 MBD5Q9P267 1494 aa20.82■□□□□ 0.92
SCARB2-223ENST00000640640 TNMDQ9H2S6 317 aa20.81■□□□□ 0.92
SCARB2-223ENST00000640640 IFIT1P09914 478 aaKnown RBP20.81■□□□□ 0.92
SCARB2-223ENST00000640640 SPATA32Q96LK8 384 aa20.81■□□□□ 0.92
SCARB2-223ENST00000640640 FERMT3Q86UX7 667 aa20.81■□□□□ 0.92
SCARB2-223ENST00000640640 ZBTB3Q9H5J0 574 aa20.8■□□□□ 0.92
SCARB2-223ENST00000640640 C8orf34Q49A92 452 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 GOLGA6L1Q8N7Z2 621 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
SCARB2-223ENST00000640640 KRT24Q2M2I5 525 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 CFAP45Q9UL16 551 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 R3HCC1Q9Y3T6 440 aaKnown RBP20.79■□□□□ 0.92
SCARB2-223ENST00000640640 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
SCARB2-223ENST00000640640 UBE3BQ7Z3V4 1068 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 DDX11Q96FC9 970 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 TDO2P48775 406 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 IMMTQ16891 758 aaKnown RBP20.79■□□□□ 0.92
SCARB2-223ENST00000640640 LRP2BPQ9P2M1 347 aa20.79■□□□□ 0.92
SCARB2-223ENST00000640640 CCDC69A6NI79 296 aa20.78■□□□□ 0.92
SCARB2-223ENST00000640640 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
SCARB2-223ENST00000640640 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
SCARB2-223ENST00000640640 SSFA2P28290 1259 aa20.78■□□□□ 0.92
SCARB2-223ENST00000640640 TNPO1Q92973 898 aaKnown RBP20.78■□□□□ 0.92
SCARB2-223ENST00000640640 ZBTB40Q9NUA8 1239 aa20.78■□□□□ 0.92
SCARB2-223ENST00000640640 CTDP1Q9Y5B0 961 aaPredicted RBP20.78■□□□□ 0.92
SCARB2-223ENST00000640640 SDSP20132 328 aa20.78■□□□□ 0.92
SCARB2-223ENST00000640640 RHPN1Q8TCX5 695 aa20.78■□□□□ 0.92
SCARB2-223ENST00000640640 CEP89Q96ST8 783 aa20.77■□□□□ 0.92
SCARB2-223ENST00000640640 EYA1Q99502 592 aa20.77■□□□□ 0.92
SCARB2-223ENST00000640640 SNRPA1P09661 255 aaKnown RBP20.77■□□□□ 0.92
SCARB2-223ENST00000640640 PIP4K2BP78356 416 aa20.77■□□□□ 0.92
SCARB2-223ENST00000640640 MAP3K19Q56UN5 1328 aa20.77■□□□□ 0.92
SCARB2-223ENST00000640640 NUP133Q8WUM0 1156 aa20.77■□□□□ 0.91
SCARB2-223ENST00000640640 AIDAQ96BJ3 306 aa20.77■□□□□ 0.91
SCARB2-223ENST00000640640 EVI5LQ96CN4 794 aa20.77■□□□□ 0.91
SCARB2-223ENST00000640640 TCEAL9Q9UHQ7 104 aa20.77■□□□□ 0.91
SCARB2-223ENST00000640640 KCNA6P17658 529 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 SH2B1Q9NRF2 756 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-223ENST00000640640 LIMCH1Q9UPQ0 1083 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 TBX22Q9Y458 520 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 SAMD1Q6SPF0 538 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-223ENST00000640640 BICDL1Q6ZP65 573 aa20.76■□□□□ 0.91
SCARB2-223ENST00000640640 ABCF2Q9UG63 623 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms