RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 TRIM44Q96DX7 344 aaPredicted RBP12.61□□□□□ -0.39
PAX6-244ENST00000638913 IL1RAPL2Q9NP60 686 aa12.61□□□□□ -0.39
PAX6-244ENST00000638913 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
PAX6-244ENST00000638913 LRRFIP2Q9Y608 721 aaKnown RBP12.61□□□□□ -0.39
PAX6-244ENST00000638913 REC8O95072 547 aa12.6□□□□□ -0.39
PAX6-244ENST00000638913 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 PALD1Q9ULE6 856 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 CEP170BQ9Y4F5 1589 aaPredicted RBP12.59□□□□□ -0.39
PAX6-244ENST00000638913 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 EIF2S2P20042 333 aaKnown RBP12.59□□□□□ -0.39
PAX6-244ENST00000638913 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 IL17REQ8NFR9 667 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 LRRCC1Q9C099 1032 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 PHAXQ9H814 394 aaKnown RBP12.59□□□□□ -0.39
PAX6-244ENST00000638913 ANO2Q9NQ90 1003 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 ZDHHC9Q9Y397 364 aa12.59□□□□□ -0.39
PAX6-244ENST00000638913 ARHGEF10O15013 1369 aa12.58□□□□□ -0.39
PAX6-244ENST00000638913 FLT4P35916 1363 aa12.58□□□□□ -0.39
PAX6-244ENST00000638913 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 ESPNB1AK53 854 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 NUCB2P80303 420 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 KLHL40Q2TBA0 621 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 LMBRD1Q9NUN5 540 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 NRKQ7Z2Y5 1582 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 MX1P20591 662 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.4
PAX6-244ENST00000638913 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 CCDC30Q5VVM6 783 aa12.58□□□□□ -0.4
PAX6-244ENST00000638913 SBNO1A3KN83 1393 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 CLCN1P35523 988 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 PLEKHG1Q9ULL1 1385 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 IGSF1Q8N6C5 1336 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 CYP2E1P05181 493 aaPredicted RBP12.57□□□□□ -0.4
PAX6-244ENST00000638913 HOXC9P31274 260 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 UPF3BQ9BZI7 483 aaKnown RBP12.57□□□□□ -0.4
PAX6-244ENST00000638913 ARHGAP23Q9P227 1491 aa12.57□□□□□ -0.4
PAX6-244ENST00000638913 ANXA1P04083 346 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 PTMSP20962 102 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 ATP8B2P98198 1209 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 ESYT1Q9BSJ8 1104 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 IL25Q9H293 177 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
PAX6-244ENST00000638913 SLIT1O75093 1534 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 GPT2Q8TD30 523 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
PAX6-244ENST00000638913 DTNBO60941 627 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 GNAI3P08754 354 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 CLEC17AQ6ZS10 378 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
PAX6-244ENST00000638913 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 OSBPL3Q9H4L5 887 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
PAX6-244ENST00000638913 CHMLP26374 656 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
PAX6-244ENST00000638913 UBTFL1P0CB47 393 aaPredicted RBP12.54□□□□□ -0.4
PAX6-244ENST00000638913 KCNA6P17658 529 aa12.54□□□□□ -0.4
PAX6-244ENST00000638913 TAF7Q15545 349 aaPredicted RBP12.54□□□□□ -0.4
PAX6-244ENST00000638913 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
PAX6-244ENST00000638913 KCNQ3O43525 872 aa12.54□□□□□ -0.4
PAX6-244ENST00000638913 SURF6O75683 361 aaKnown RBP12.54□□□□□ -0.4
PAX6-244ENST00000638913 PRIM1P49642 420 aaKnown RBP12.54□□□□□ -0.4
PAX6-244ENST00000638913 RBSNQ9H1K0 784 aa12.54□□□□□ -0.4
PAX6-244ENST00000638913 LGR6Q9HBX8 967 aa12.54□□□□□ -0.4
PAX6-244ENST00000638913 KDRP35968 1356 aa12.53□□□□□ -0.4
PAX6-244ENST00000638913 SALL3Q9BXA9 1300 aa12.53□□□□□ -0.4
PAX6-244ENST00000638913 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.4
PAX6-244ENST00000638913 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.4
PAX6-244ENST00000638913 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.4
PAX6-244ENST00000638913 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
PAX6-244ENST00000638913 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
PAX6-244ENST00000638913 SYCE3A1L190 88 aa12.51□□□□□ -0.41
PAX6-244ENST00000638913 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
PAX6-244ENST00000638913 TMEM63CQ9P1W3 806 aa12.51□□□□□ -0.41
PAX6-244ENST00000638913 SRGAP3O43295 1099 aa12.51□□□□□ -0.41
PAX6-244ENST00000638913 MCCP23508 829 aa12.51□□□□□ -0.41
PAX6-244ENST00000638913 TBX22Q9Y458 520 aa12.51□□□□□ -0.41
PAX6-244ENST00000638913 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
PAX6-244ENST00000638913 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 RNF214Q8ND24 703 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 CHPF2Q9P2E5 772 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 RGPD8O14715 1765 aaPredicted RBP12.5□□□□□ -0.41
PAX6-244ENST00000638913 NBPF6Q5VWK0 638 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
PAX6-244ENST00000638913 NBPF4Q96M43 638 aa12.5□□□□□ -0.41
PAX6-244ENST00000638913 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
PAX6-244ENST00000638913 ZNF445P59923 1031 aa12.49□□□□□ -0.41
PAX6-244ENST00000638913 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
PAX6-244ENST00000638913 SRCIN1Q9C0H9 1055 aa12.49□□□□□ -0.41
PAX6-244ENST00000638913 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
PAX6-244ENST00000638913 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
PAX6-244ENST00000638913 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
PAX6-244ENST00000638913 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
PAX6-244ENST00000638913 NALCNQ8IZF0 1738 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms